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9 events found

Scientific topics: Software engineering 

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  • RNA-Seq using R

    28 September 2015

    Melbourne, Australia

    RNA-Seq using R https://tess.elixir-europe.org/events/rna-seq-using-r The Monash Bioinformatics Platform want to help make introductory bioinformatic approaches part of the research landscape in Biomedicine. To do this, a foundation level of expertise amongst as many researchers as possible is an important step forward. The platform will then be available to facilitate this work as well as develop more advanced bioinformatic projects with our researchers. We are running a two day hands-on workshop with a focus on enabling researchers to be able to analyse RNASeq (next-gen sequencing) data. Day 1, we will begin by teaching an introduction to programming using the R language. Day 2 will focus on using this knowledge to perform bioinformatic data analysis of some RNASeq data. Day one (Programming in R) is optional, for those well-versed in the R programming language, or programming in general. The workshop will be taught in a similar style to Software Carpentry workshops. Software Carpentry's mission is to help scientists and engineers get more research done in less time and with less pain by teaching them basic lab skills for scientific computing. For more information on what we teach and why, please see our paper "Best Practices for Scientific Computing". Who: The course is aimed at graduate students and other researchers. 2015-09-28 09:00:00 UTC 2015-09-28 00:00:00 UTC Monash Bioinformatics Platform, Melbourne, Australia Monash Bioinformatics Platform Melbourne Australia Computer science Biomedical science Software engineering Computational biology RNA-Seq [] [] [] workshops_and_courses [] ABRBioinformaticsComputationalBiology
  • Intro to Python

    29 October 2015

    Melbourne, Australia

    Intro to Python https://tess.elixir-europe.org/events/intro-to-python Intro to Python 2015-10-29 09:00:00 UTC 2015-10-29 00:00:00 UTC Monash University Monash Bioinformatics Platform, Melbourne, Australia Monash Bioinformatics Platform Melbourne Australia Software engineering [] [] [] workshops_and_courses [] ABRBioinformaticsComputationalBiology
  • RNASeq using R

    30 November 2015

    Melbourne, Australia

    RNASeq using R https://tess.elixir-europe.org/events/rnaseq-using-r RNA-Seq using R 2015-11-30 09:00:00 UTC 2015-11-30 00:00:00 UTC Monash University Monash Bioinformatics Platform, Melbourne, Australia Monash Bioinformatics Platform Melbourne Australia Computational biology Software engineering RNA-Seq [] [] [] workshops_and_courses [] ABRBioinformaticsComputationalBiology
  • Intro to Python

    31 March 2016

    Melbourne, Australia

    Intro to Python https://tess.elixir-europe.org/events/intro-to-python-60e190cd-a691-4657-9a32-db3b959482ab Intro to Python 2016-03-31 09:00:00 UTC 2016-03-31 00:00:00 UTC Monash University Monash Bioinformatics Platform, Melbourne, Australia Monash Bioinformatics Platform Melbourne Australia Computer science Biomedical science Software engineering [] [] [] workshops_and_courses [] ABRBioinformatics
  • RNAseq using R

    1 - 2 June 2016

    Melbourne, Australia

    RNAseq using R https://tess.elixir-europe.org/events/rnaseq-using-r-632bdf76-dd3d-4c41-9e65-b175a2bb37e6 The Monash Bioinformatics Platform want to help make introductory bioinformatic approaches part of the research landscape in Biomedicine. To do this, a foundation level of expertise amongst as many researchers as possible is an important step forward. The platform will then be available to facilitate this work as well as develop more advanced bioinformatic projects with our researchers. We are running a two day hands-on workshop with a focus on enabling researchers to be able to analyse RNASeq (next-gen sequencing) data. Day 1, we will begin by teaching an introduction to programming using the R language. Day 2 will focus on using this knowledge to perform bioinformatic data analysis of some RNASeq data. The workshop will be taught in a similar style to Software Carpentry workshops. Software Carpentry's mission is to help scientists and engineers get more research done in less time and with less pain by teaching them basic lab skills for scientific computing. For more information on what we teach and why, please see our paper "Best Practices for Scientific Computing". Who: The course is aimed at graduate students and other researchers. You don't need to have any previous knowledge of the tools that will be presented at the workshop. 2016-06-01 09:00:00 UTC 2016-06-02 00:00:00 UTC Monash University Monash Bioinformatics Platform, Melbourne, Australia Monash Bioinformatics Platform Melbourne Australia Software engineering Computational biology RNA-Seq [] [] [] workshops_and_courses [] ABRBioinformaticsComputationalBiology
  • AutoDesk Inventor Training

    29 - 30 June 2016

    Melbourne, Australia

    AutoDesk Inventor Training https://tess.elixir-europe.org/events/autodesk-inventor-training Autodesk Inventor training 2016-06-29 09:00:00 UTC 2016-06-30 00:00:00 UTC University of Melbourne University of Melbourne, Melbourne, Australia University of Melbourne Melbourne Australia Software engineering Data visualisation Data architecture, analysis and design [] [] [] workshops_and_courses [] ABR
  • Advanced Python For Biologists

    25 July - 29 May 2016

    Edinburgh, United Kingdom

    Advanced Python For Biologists https://tess.elixir-europe.org/events/advanced-python-for-biologists-3b007f2f-c334-478c-8b5b-cdbb7a7ce5ee This workshop is aimed at people who already have a basic knowledge of Python and are interested in using the language to tackle larger problems. In it, we will look in detail at the parts of the language which are particularly useful in scientific programming, and at the tools Python offers for making development faster and easier. The course will use examples and exercises drawn from various aspects of bioinformatics work. After completing the workshop, students should be in a position to (1) take advantage of the advanced language features in their own programs and (2) use appropriate tools when developing software programs. 2016-07-25 09:00:00 UTC 2016-05-29 00:00:00 UTC The University of Edinburgh, Edinburgh, United Kingdom The University of Edinburgh Edinburgh United Kingdom EH9 3FD Bioinformatics Software engineering Biology [] [] [] workshops_and_courses [] []
  • Parallel Programming for HPC at LTU Bundoora

    20 September 2016

    Melbourne, Australia

    Parallel Programming for HPC at LTU Bundoora https://tess.elixir-europe.org/events/parallel-programming-for-hpc-at-ltu-bundoora This intensive full-day course presented by Intersect Australia Limited, introduces different parallel programming methods: OpenMP as a widespread method for a shared memory programming model and MPI as the standard for a distributed memory programming model. It is targeted at C and Fortran programmers. Who can access Intersect training services? * Researchers, research groups, and Higher-Degree Research students from any Intersect member organisation. * For people and organisations outside the Intersect membership, training can be provided on a fee-for-service basis. Please email: training@intersect.org.au. 2016-09-20 09:00:00 UTC 2016-09-20 00:00:00 UTC La Trobe University Bundoora , Melbourne, Australia Bundoora Melbourne Australia Computer science Software engineering [] [] [] workshops_and_courses [] ABR
  • Introduction to Python for Biologists

    12 - 16 December 2016

    Edinburgh, United Kingdom

    Introduction to Python for Biologists https://tess.elixir-europe.org/events/introduction-to-python-for-biologists-d358d018-fabc-4a90-9b9c-cfd4475411f5 Python is a dynamic, readable language that is a popular platform for all types of bioinformatics work, from simple one-off scripts to large, complex software projects. This workshop is aimed at complete beginners and assumes no prior programming experience. It gives an overview of the language with an emphasis on practical problem-solving, using examples and exercises drawn from various aspects of bioinformatics work. The workshop is structured so that the parts of the language most useful for bioinformatics are introduced as early as possible, and that students can start writing plausibly-useful programs after the first few sessions. After completing the workshop, students should be in a position to (1) apply the skills they have learned to tackling problems in their own research and (2) continue their Python education in a self-directed way. 2016-12-12 00:00:00 UTC 2016-12-16 00:00:00 UTC Edinburgh Genomics The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom Software engineering Bioinformatics [] [] [] workshops_and_courses [] BioinformaticsComputerprogrammingPython
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