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211 events found

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  • Ensembl REST API Workshop, Bogota, 12 February 2019

    12 February 2019

    Bogota, Colombia

    Elixir node event
    Ensembl REST API Workshop, Bogota, 12 February 2019 https://tess.elixir-europe.org/events/ensembl-rest-api-workshop-bogota-12-february-2019 Work with Ensembl to master the Ensembl REST APIs and flexibly access genome-wide data, such as genes, variants, regulatory features, homologues and alignments. 2019-02-12 09:00:00 UTC 2019-02-12 15:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] HDRUK
  • Introduction to Galaxy & the Genomics Virtual Laboratory

    21 - 22 March 2019

    Melbourne, Australia

    Introduction to Galaxy & the Genomics Virtual Laboratory https://tess.elixir-europe.org/events/introduction-to-galaxy-and-the-genomics-virtual-laboratory-3b2532e3-a1fc-414c-9bb4-936bf288ac48 2019-03-21 09:00:00 UTC 2019-03-22 00:00:00 UTC Melbourne Bioinformatics 187 Grattan St, 187, Grattan Street, Melbourne, Australia 187 Grattan St, 187, Grattan Street Melbourne Melbourne City Australia [] enquiries @ melbourne bio informatics . org.au [] [] [] [] []
  • Genome Browsers and using UCSC genome Browser tools

    25 - 26 March 2019

    Melbourne, Australia

    Genome Browsers and using UCSC genome Browser tools https://tess.elixir-europe.org/events/genome-browsers-and-using-ucsc-genome-browser-tools-e7d28a75-046c-4e5d-9132-6880c7f35d67 2019-03-25 09:00:00 UTC 2019-03-26 00:00:00 UTC Melbourne Bioinformatics 187 Grattan St, 187, Grattan Street, Melbourne, Australia 187 Grattan St, 187, Grattan Street Melbourne Australia [] enquiries @ melbourne bio informatics . org.au [] [] [] [] []
  • Introduction to Variant Calling with Galaxy & the GVL

    26 - 27 March 2019

    Melbourne, Australia

    Introduction to Variant Calling with Galaxy & the GVL https://tess.elixir-europe.org/events/introduction-to-variant-calling-with-galaxy-the-gvl 2019-03-26 09:00:00 UTC 2019-03-27 00:00:00 UTC Melbourne Bioinformatics 187 Grattan St, 187, Grattan Street, Melbourne, Australia 187 Grattan St, 187, Grattan Street Melbourne Australia [] enquiries @ melbourne bio informatics . org.au [] [] [] [] []
  • Introduction to long-read genome assembly

    5 April 2019

    Melbourne, Australia

    Introduction to long-read genome assembly https://tess.elixir-europe.org/events/introduction-to-long-read-genome-assembly-c43a1031-7b9c-4893-8b28-7844d2bc1741 2019-04-05 09:00:00 UTC 2019-04-05 17:00:00 UTC Melbourne Bioinformatics 187 Grattan St, 187, Grattan Street, Melbourne, Australia 187 Grattan St, 187, Grattan Street Melbourne Australia Bioinformatics University of Melbourne [] [] [] [] bioinformaticsGalaxyGenome Assembly
  • Data tidying with Python and Pandas

    20 May 2019

    Melbourne, Australia

    Data tidying with Python and Pandas https://tess.elixir-europe.org/events/data-tidying-with-python-and-pandas 2019-05-20 09:00:00 UTC 2019-05-20 16:30:00 UTC Melbourne Bioinformatics 187 Grattan St, 187, Grattan Street, Melbourne, Australia 187 Grattan St, 187, Grattan Street Melbourne Australia Bioinformatics University of Melbourne [] [] [] [] bioinformaticsGalaxypython
  • Data visualisation with Python

    22 May 2019

    Melbourne, Australia

    Data visualisation with Python https://tess.elixir-europe.org/events/data-visualisation-with-python 2019-05-22 09:00:00 UTC 2019-05-22 16:30:00 UTC Melbourne Bioinformatics 187 Grattan St, 187, Grattan Street, Melbourne, Australia 187 Grattan St, 187, Grattan Street Melbourne Australia Bioinformatics University of Melbourne [] [] [] [] bioinformaticsGalaxypython
  • Common Workflow Language for Bioinformatics

    23 May 2019

    Melbourne, Australia

    Common Workflow Language for Bioinformatics https://tess.elixir-europe.org/events/common-workflow-language-for-bioinformatics 2019-05-23 09:00:00 UTC 2019-05-23 12:30:00 UTC Melbourne Bioinformatics 187 Grattan St, Ground Floor , Melbourne, Australia 187 Grattan St, Ground Floor Melbourne Melbourne City Australia 3053 Bioinformatics Melbourne Bioinformatics [] [] [] [] bioinformaticsCWL
  • Introduction to Linux and HPC for biologists

    27 May 2019

    Melbourne, Australia

    Introduction to Linux and HPC for biologists https://tess.elixir-europe.org/events/introduction-to-linux-and-hpc-for-biologists 2019-05-27 09:30:00 UTC 2019-05-27 16:30:00 UTC Melbourne Bioinformatics 187 Grattan St, 187, Grattan Street, Melbourne, Australia 187 Grattan St, 187, Grattan Street Melbourne Melbourne City Australia Bioinformatics University of Melbourne [] [] [] [] HPCbioinformaticslinux
  • Advanced Linux and Shell Scripting for biologists

    28 May 2019

    Melbourne, Australia

    Advanced Linux and Shell Scripting for biologists https://tess.elixir-europe.org/events/advanced-linux-and-shell-scripting-for-biologists 2019-05-28 09:00:00 UTC 2019-05-28 17:00:00 UTC Melbourne Bioinformatics 187 Grattan St, 187, Grattan Street, Melbourne, Australia 187 Grattan St, 187, Grattan Street Melbourne Melbourne City Australia 3053 Bioinformatics [] [] [] [] [] Linuxbioinformatics
  • Containerised Bioinformatics: Docker and other tools for reproducible analysis

    30 May 2019

    Melbourne, Australia

    Containerised Bioinformatics: Docker and other tools for reproducible analysis https://tess.elixir-europe.org/events/containerised-bioinformatics-docker-and-other-tools-for-reproducible-analysis-0b64e419-834f-43dd-8605-6ed093fc6caa 2019-05-30 09:00:00 UTC 2019-05-30 17:00:00 UTC Melbourne Bioinformatics 187 Grattan St, 187, Grattan Street, Melbourne, Australia 187 Grattan St, 187, Grattan Street Melbourne Melbourne City Australia 3053 Bioinformatics University of Melbourne [] [] [] [] bioinformaticsDocker
  • R Introductory Workshop

    4 June 2019

    Melbourne, Australia

    R Introductory Workshop https://tess.elixir-europe.org/events/r-introductory-workshop-d4c3cbe2-3920-48b4-ad80-f082c2a277b0 2019-06-04 09:00:00 UTC 2019-06-04 17:00:00 UTC Research Platforms Services The University of Melbourne Colab Training Room #329 Level 3, Eastern Resource Centre Parkville, VIC 3010, Melbourne, Australia The University of Melbourne Colab Training Room #329 Level 3, Eastern Resource Centre Parkville, VIC 3010 Melbourne Australia 3053 Bioinformatics University of Melbourne [] [] [] [] bioinformatics
  • Best Practices in Bioinformatics Software Development

    5 June 2019

    Melbourne, Australia

    Best Practices in Bioinformatics Software Development https://tess.elixir-europe.org/events/best-practices-in-bioinformatics-software-development 2019-06-05 09:00:00 UTC 2019-06-05 17:00:00 UTC Melbourne Bioinformatics 187 Grattan St, 187, Grattan Street, Melbourne, Australia 187 Grattan St, 187, Grattan Street Melbourne Australia Bioinformatics University of Melbourne [] [] [] [] bioinformaticsGalaxy
  • Introduction to Python for Biologists

    8 - 12 July 2019

    Edinburgh, United Kingdom

    Elixir node event
    Introduction to Python for Biologists https://tess.elixir-europe.org/events/introduction-to-python-for-biologists-d98f6dfb-45c5-4377-bbe9-9e8d30ed086d Python is a dynamic, readable language that is a popular platform for all types of bioinformatics work, from simple one-off scripts to large, complex software projects. This workshop is aimed at complete beginners and assumes no prior programming experience. It gives an overview of the language with an emphasis on practical problem-solving, using examples and exercises drawn from various aspects of bioinformatics work. The workshop is structured so that the parts of the language most useful for bioinformatics are introduced as early as possible, and that students can start writing plausibly-useful programs after the first few sessions. After completing the workshop, students should be in a position to (1) apply the skills they have learned to tackling problems in their own research and (2) continue their Python education in a self-directed way. 2019-07-08 09:00:00 UTC 2019-07-12 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom EH9 3JN Genomics Bioinformatics Edinburgh Genomics Training Team - edge-training@ed.ac.uk [] [] workshops_and_courses [] BioinformaticsGenomicsPython
  • Introduction to RNA-seq Data Analysis

    5 - 7 August 2019

    Edinburgh, United Kingdom

    Elixir node event
    Introduction to RNA-seq Data Analysis https://tess.elixir-europe.org/events/introduction-to-rna-seq-data-analysis-5989e86e-a408-481d-b3c7-5a1413b0e4a6 RNA sequencing (RNA-seq) is quickly becoming the method of choice for transcriptome profiling. Nevertheless, it is a non-trivial task to transform the vast amount of data obtained with high-throughput sequencers into useful information. Thus, RNA-seq data analysis is still a major bottleneck for most researchers in this field. The ability of correctly interpreting RNA-seq results, as well as knowledge on the intrinsic properties of these data, are essential to avoid incorrect experimental designs and the application of inappropriate analysis methodologies. The aim of this workshop is to familiarise researchers with RNA-seq data and to initiate them in the analysis by providing lectures and practicals on analysis methodologies. In the practicals Illumina-generated sequencing data and various widely used software programs will be used. 2019-08-05 09:00:00 UTC 2019-08-07 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom EH9 3JN RNA-Seq Genomics Bioinformatics Edinburgh Genomics Edinburgh Genomics Training Team - edge-training@ed.ac.uk [] [] workshops_and_courses [] BioinformaticsGenomicsRNA-seq
  • Victorian Cancer Bioinformatics Symposium 2019

    16 August 2019

    Melbourne, Australia

    Victorian Cancer Bioinformatics Symposium 2019 https://tess.elixir-europe.org/events/victorian-cancer-bioinformatics-symposium-2019 2019-08-16 09:00:00 UTC 2019-08-16 17:00:00 UTC VCCC Victorian Comprehensive Cancer Centre, 305, Grattan Street, Melbourne, Australia Victorian Comprehensive Cancer Centre, 305, Grattan Street Melbourne Melbourne City Australia 3053 Bioinformatics [] [] [] [] [] bioinformatics
  • Ensembl Browser Workshop, George Washington University, 13th September 2019

    13 September 2019

    Washington, United States of America

    Elixir node event
    Ensembl Browser Workshop, George Washington University, 13th September 2019 https://tess.elixir-europe.org/events/ensembl-browser-workshop-george-washington-university-13th-september-2019 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2019-09-13 09:00:00 UTC 2019-09-13 09:00:00 UTC George Washington University, Washington, United States of America George Washington University Washington United States of America DC 20052 [] Benjamin Moore [] [] [] [] HDRUK
  • Melbourne R package development workshop

    16 September 2019

    Melbourne, Australia

    Melbourne R package development workshop https://tess.elixir-europe.org/events/melbourne-r-package-development-workshop 2019-09-16 09:00:00 UTC 2019-09-16 17:00:00 UTC COMBINE Walter and Eliza Hall Institute, Melbourne, Australia Walter and Eliza Hall Institute Melbourne Australia Bioinformatics [] [] [] [] [] bioinformatics
  • Implementing Scalable Bioinformatic Workflows in Snakemake & Nextflow (University of Melbourne)

    25 - 26 September 2019

    Melbourne, Australia

    Implementing Scalable Bioinformatic Workflows in Snakemake & Nextflow (University of Melbourne) https://tess.elixir-europe.org/events/implementing-scalable-bioinformatic-workflows-in-snakemake-nextflow-23941db7-c610-4aaf-8789-f55c938edb0d 2019-09-25 12:00:00 UTC 2019-09-26 16:00:00 UTC EMBL-ABR Melbourne Bioinformatics 187 Grattan St University of Melbourne CARLTON, VIC 3053, Melbourne, Australia Melbourne Bioinformatics 187 Grattan St University of Melbourne CARLTON, VIC 3053 Melbourne Australia Bioinformatics University of Melbourne [] [] [] [] bioinformaticsSnakemakeNextflow
  • Implementing Scalable Bioinformatic Workflows in Snakemake & Nextflow (Hudson Institute)

    25 - 26 September 2019

    Melbourne, Australia

    Implementing Scalable Bioinformatic Workflows in Snakemake & Nextflow (Hudson Institute) https://tess.elixir-europe.org/events/implementing-scalable-bioinformatic-workflows-in-snakemake-nextflow-c253f254-38a1-4de9-b3cf-8abf216453db 2019-09-25 12:00:00 UTC 2019-09-26 16:00:00 UTC EMBL-ABR Boardroom 1, Level 3 Hudson Institute of Medical Research 27-31 Wright Street Clayton, VIC 3168, Melbourne, Australia Boardroom 1, Level 3 Hudson Institute of Medical Research 27-31 Wright Street Clayton, VIC 3168 Melbourne Australia Bioinformatics [] [] [] [] [] bioinformaticsNextflowSnakemake
  • Implementing Scalable Bioinformatic Workflows in Snakemake & Nextflow (Monash University)

    25 - 26 September 2019

    Melbourne, Australia

    Implementing Scalable Bioinformatic Workflows in Snakemake & Nextflow (Monash University) https://tess.elixir-europe.org/events/implementing-scalable-bioinformatic-workflows-in-snakemake-nextflow-monash-university 2019-09-25 12:00:00 UTC 2019-09-26 16:00:00 UTC EMBL-ABR L1.02, 44 Exhibition Walk Matheson Library Monash University Clayton, VIC, Melbourne, Australia L1.02, 44 Exhibition Walk Matheson Library Monash University Clayton, VIC Melbourne Australia Bioinformatics Monash University [] [] [] [] SnakemakeNextflowbioinformatics
  • RNA-Seq Differential Gene Expression Analysis using Galaxy and the GVL

    4 October 2019

    Melbourne, Australia

    RNA-Seq Differential Gene Expression Analysis using Galaxy and the GVL https://tess.elixir-europe.org/events/rna-seq-differential-gene-expression-analysis-using-galaxy-and-the-gvl-39b2ddbd-bddb-44c7-bbec-b317ebdb7224 2019-10-04 01:00:00 UTC 2019-10-04 04:00:00 UTC Melbourne Bioinformatics Arts West North Wing Room 355 Professors Walk University of Melbourne Carlton, VIC 3053, Melbourne, Australia Arts West North Wing Room 355 Professors Walk University of Melbourne Carlton, VIC 3053 Melbourne Australia 3053 RNA-Seq Bioinformatics University of Melbourne [] [] [] [] bioinformaticsRNA-SeqGalaxy
  • Introduction to R for Biologists

    4 October 2019

    Melbourne, Australia

    Introduction to R for Biologists https://tess.elixir-europe.org/events/introduction-to-r-for-biologists-95e4ec05-5cf6-4e58-8d69-71b4e8078eb5 2019-10-04 09:00:00 UTC 2019-10-04 12:00:00 UTC Melbourne Bioinformatics Arts West North Wing Room 355 Professors Walk University of Melbourne Carlton, VIC 3053 Australia , Melbourne, Australia Arts West North Wing Room 355 Professors Walk University of Melbourne Carlton, VIC 3053 Australia Melbourne Australia 3053 Bioinformatics University of Melbourne [] [] [] [] bioinformatics
  • RNA-seq workshop for beginners: from sequences to visualization using Galaxy and R

    7 - 9 October 2019

    Rotterdam, Netherlands

    RNA-seq workshop for beginners: from sequences to visualization using Galaxy and R https://tess.elixir-europe.org/events/rna-seq-workshop-for-beginners-from-sequences-to-visualization-using-galaxy-and-r Educators: Bérénice Batut, Helena Rasche (RBC), Saskia Hiltemann, Mateusz Kuzak, Fotis Psomopoulos Date: 07-09.10.2019 Location: Rotterdam, Thessaloniki, Tartu, Contents: Galaxy introduction and RNA-seq Learning goals: - Use Galaxy for data analysis - Control the quality of sequencing data - Map data to a reference genome - Analyze RNA-seq data using a reference genome - Learn basics of R programming Prerequisites: None (Beginner Course) Keywords: Galaxy, Mapping, Quality control, RNA-seq, R, Rstudio Tools: Galaxy, R, Rstudio 2019-10-07 09:00:00 UTC 2019-10-09 17:00:00 UTC de.NBI Rotterdam, Rotterdam, Netherlands Rotterdam Rotterdam Regierung von Rotterdam Netherlands [] [] [] workshops_and_courses [] []
  • RNA-seq workshop for beginners: from sequences to visualization using Galaxy and R

    7 - 9 October 2019

    Rotterdam, Estonia

    Elixir node event
    RNA-seq workshop for beginners: from sequences to visualization using Galaxy and R https://tess.elixir-europe.org/events/rna-seq-workshop-for-beginners-from-sequences-to-visualization-using-galaxy-and-r-77203128-a073-4ba7-a5f1-d61aad6340c6 the Gallantries team (Freiburg Galaxy Team, DTL, the Netherlands eScience Center, and Erasmus MC in the Netherlands, and INAB CERTH in Greece) offers a Galaxy workshop on RNA-seq data analysis on October 7-9th. The workshop will cover: Galaxy introduction Introduction to High-Throughput Sequencing… The post RNA-seq workshop for beginners: from sequences to visualization using Galaxy and R appeared first on Dutch Techcentre for Life Sciences. 2019-10-07 09:00:00 UTC 2019-10-09 00:00:00 UTC Rotterdam, Netherlands, Thessaloniki, GR and Tartu, EE, Rotterdam, Estonia Rotterdam, Netherlands, Thessaloniki, GR and Tartu, EE Rotterdam Estonia [] [] [] workshops_and_courses [] []
  • Genome Browsers and using UCSC genome Browser tools

    14 October 2019

    Melbourne, Australia

    Genome Browsers and using UCSC genome Browser tools https://tess.elixir-europe.org/events/genome-browsers-and-using-ucsc-genome-browser-tools-70a0b83a-7dd0-4289-8dfb-685b68faa1dc 2019-10-14 01:00:00 UTC 2019-10-14 16:00:00 UTC Melbourne Bioinformatics 187 Grattan St Carlton , Melbourne, Australia 187 Grattan St Carlton Melbourne Australia 3053 Bioinformatics University of Melbourne [] [] [] [] bioinformaticsgenome browsing
  • Ensembl Browser Workshop, IGMM, Edinburgh, 22 October 2019

    22 October 2019

    Edinburgh, United Kingdom

    Elixir node event
    Ensembl Browser Workshop, IGMM, Edinburgh, 22 October 2019 https://tess.elixir-europe.org/events/ensembl-browser-workshop-igmm-edinburgh-22-october-2019 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2019-10-22 09:00:00 UTC 2019-10-22 17:00:00 UTC Institute of Genetics and Molecular Medicine (IGMM), Edinburgh, United Kingdom Institute of Genetics and Molecular Medicine (IGMM) Edinburgh United Kingdom EH4 2XU [] Astrid Gall [] [] [] [] HDRUK
  • Introduction to Linux and HPC for biologists

    30 October 2019

    Melbourne, Australia

    Introduction to Linux and HPC for biologists https://tess.elixir-europe.org/events/introduction-to-linux-and-hpc-for-biologists-e3dd792c-1b9d-4539-96ba-53226bc84a38 2019-10-30 01:00:00 UTC 2019-10-30 17:00:00 UTC Melbourne Bioinformatics University of Melbourne, Melbourne, Australia University of Melbourne Melbourne Australia 3053 Bioinformatics University of Melbourne [] [] [] [] bioinformaticsHPClinux
  • Advanced Linux and Shell Scripting for biologists

    31 October 2019

    Melbourne, Australia

    Advanced Linux and Shell Scripting for biologists https://tess.elixir-europe.org/events/advanced-linux-and-shell-scripting-for-biologists-ab563b04-f224-494d-a7cd-283d078a1f92 2019-10-31 01:00:00 UTC 2019-10-31 17:00:00 UTC Melbourne Bioinformatics Room 355 Arts West North Wing Professors Walk, Melbourne, Australia Room 355 Arts West North Wing Professors Walk Melbourne Australia Bioinformatics University of Melbourne [] [] [] [] bioinformaticslinuxShell script
  • Introduction to protein-protein interactions using BioGRID and IntAct

    1 November 2019

    Melbourne, Australia

    Introduction to protein-protein interactions using BioGRID and IntAct https://tess.elixir-europe.org/events/introduction-to-protein-protein-interactions-using-biogrid-and-intact 2019-11-01 09:30:00 UTC 2019-11-01 16:30:00 UTC Melbourne Bioinformatics 187 Grattan St , Melbourne, Australia 187 Grattan St Melbourne Australia 3053 Bioinformatics University of Melbourne [] [] [] [] bioinformatics
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