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4 events found

Organizer: bioinformatics.ca  or NBIC 

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City: Bogota  or Copenhagen  or Edinburgh  or Palm Springs  or Montreal  or Nijmegen 

  • Protein structures: production prowess, power, promises, and problems

    31 October - 4 November 2011

    Nijmegen, Netherlands

    Protein structures: production prowess, power, promises, and problems https://tess.elixir-europe.org/events/protein-structures-production-prowess-power-promises-and-problems 2011-10-31 00:00:00 UTC 2011-11-04 00:00:00 UTC NBIC Center for Molecular and Biomolecular Informatics (CMBI), Nijmegen, Netherlands Center for Molecular and Biomolecular Informatics (CMBI) Nijmegen Netherlands Proteomics [] [] [] workshops_and_courses [] []
  • RNA-seq data analysis

    30 October - 1 November 2013

    Nijmegen, Netherlands

    RNA-seq data analysis https://tess.elixir-europe.org/events/rna-seq-data-analysis 2013-10-30 00:00:00 UTC 2013-11-01 00:00:00 UTC NBIC Nijmegen, Netherlands Nijmegen Netherlands Metagenomics Bioinformatics [] [] [] workshops_and_courses [] []
  • Protein structures: production, prowess, power, promises, and problems

    4 - 8 November 2013

    Nijmegen, Netherlands

    Protein structures: production, prowess, power, promises, and problems https://tess.elixir-europe.org/events/protein-structures-production-prowess-power-promises-and-problems-9f6cd436-4a6c-4d76-84b4-0ccea64164b2 2013-11-04 00:00:00 UTC 2013-11-08 00:00:00 UTC NBIC Nijmegen, Netherlands Nijmegen Netherlands [] [] [] workshops_and_courses [] []
  • Epigenomic Data Analysis

    15 - 16 June 2017

    Montreal, Canada

    Epigenomic Data Analysis https://tess.elixir-europe.org/events/epigenomic-data-analysis-814bc674-0a0a-42a1-9bd5-bbc43ae8b2b6 High-throughput sequencing of Chromatin-Immunoprecipitated libraries (ChIP-seq) and of bisulfite converted DNA (WGBS) have become increasingly common and have largely supplanted microarrays for chromatin and DNA methylation profiling. When processed appropriately, ChIP-seq data provides base-pair resolution representations of transcription factor DNA-binding events and nucleosome (histone) modifications genome-wide. Similarly, WGBS can provide a quantitative genome wide profile of cytosine methylation. The CBW has developed a 2-day course providing an introduction to histone ChIP-seq and WGBS data analysis followed by integrated tutorials demonstrating the use of open source ChIP-Seq and WGBS analysis packages. The tutorials are designed as self-contained units that include example data and detailed instructions for installation of all required bioinformatics tools (FASTQC, BWA, MACS2, FindER, samtools, Picard, BisSNP). The course also includes an overview of integrative epigenomic tools that have been developed to explore ChIP-Seq and WGBS data together with other epigenomic datasets such as RNA-seq, DHS-seq and ATAC-seq. Participants will gain practical experience and skills to be able to: Align ChIP-seq and WGBS sequence data to a reference genome (required) Identify narrow and broad peaks from ChIP-seq data Identify methylated levels from WGBS data Visualize and summarize the output of ChIP-Seq and WGBS analyses Explore integrative tools for epigenomic data sets 2017-06-15 08:30:00 UTC 2017-06-16 17:00:00 UTC bioinformatics.ca Montreal, Montreal, Canada Montreal Montreal Montreal Canada ChIP-seq Epigenomics [] course_info@bioinformatics.ca [] [] 30 workshops_and_courses registration_of_interest []
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