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20 events found

City: Bogota  or Copenhagen  or Edinburgh  or Ljubljana  or Barcelona  or Menlo Park 

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Keywords: ISCB  or Genomics 

  • Bioinformatics Forum for SMEs

    8 - 9 October 2012

    Barcelona, Spain

    Bioinformatics Forum for SMEs https://tess.elixir-europe.org/events/bioinformatics-forum-for-smes 2012-10-08 00:00:00 UTC 2012-10-09 00:00:00 UTC EMBL-EBI\, BioCat\, INB\, GRIB\, Psimex Barcelona Biomedical Research Park, Barcelona, Spain Barcelona Biomedical Research Park Barcelona Spain Bioinformatics [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • International Conference on Biomedical Electronics and Devices

    11 - 14 February 2013

    Barcelona, Spain

    International Conference on Biomedical Electronics and Devices https://tess.elixir-europe.org/events/international-conference-on-biomedical-electronics-and-devices 2013-02-11 16:00:00 UTC 2013-02-14 16:00:00 UTC BIOSTEC 2013 Barcelo Sants Hotel, Barcelona, Spain Barcelo Sants Hotel Barcelona Spain Medicine [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • International Conference on Bioinformatics Models, Methods and Algorithms

    11 - 14 February 2013

    Barcelona, Spain

    International Conference on Bioinformatics Models, Methods and Algorithms https://tess.elixir-europe.org/events/international-conference-on-bioinformatics-models-methods-and-algorithms 2013-02-11 16:00:00 UTC 2013-02-14 16:00:00 UTC BIOSTEC Barcelo Sants Hotel, Barcelona, Spain Barcelo Sants Hotel Barcelona Spain Systems biology Statistics and probability Bioinformatics [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • International Conference on Bio-inspired Systems and Signal Processing

    11 - 13 February 2013

    Barcelona, Spain

    International Conference on Bio-inspired Systems and Signal Processing https://tess.elixir-europe.org/events/international-conference-on-bio-inspired-systems-and-signal-processing 2013-02-11 16:00:00 UTC 2013-02-13 16:00:00 UTC BIOSTEC Barcelo Sants Hotel, Barcelona, Spain Barcelo Sants Hotel Barcelona Spain Systems biology Bioinformatics [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • 6th International Joint Conference on Biomedical Engineering Systems and Technologies

    11 - 14 February 2013

    Barcelona, Spain

    6th International Joint Conference on Biomedical Engineering Systems and Technologies https://tess.elixir-europe.org/events/6th-international-joint-conference-on-biomedical-engineering-systems-and-technologies 2013-02-11 16:00:00 UTC 2013-02-14 16:00:00 UTC BIOSTEC Barcelo Sants Hotel, Barcelona, Spain Barcelo Sants Hotel Barcelona Spain Medicine Bioinformatics [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • International Conference on Health Informatics

    11 - 14 February 2013

    Barcelona, Spain

    International Conference on Health Informatics https://tess.elixir-europe.org/events/international-conference-on-health-informatics 2013-02-11 16:00:00 UTC 2013-02-14 16:00:00 UTC BIOSTEC Barcelo Sants Hotel, Barcelona, Spain Barcelo Sants Hotel Barcelona Spain Medicine Bioinformatics [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • Computation at the Frontiers of Science

    5 - 7 June 2013

    Barcelona, Spain

    Computation at the Frontiers of Science https://tess.elixir-europe.org/events/computation-at-the-frontiers-of-science 2013-06-05 00:00:00 UTC 2013-06-07 00:00:00 UTC ICCS Barcelona, Spain Barcelona Spain Bioinformatics [] [] [] meetings_and_conferences [] OtherEventsISCB
  • How to Raise Your Company’s Voice

    10 April 2014

    Menlo Park, Afghanistan

    How to Raise Your Company’s Voice https://tess.elixir-europe.org/events/how-to-raise-your-companya-s-voice 2014-04-10 01:00:00 UTC 2014-04-10 01:00:00 UTC Janssen Labs Menlo Park, Afghanistan Menlo Park Afghanistan Genomics [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • Meet with... Correlation Ventures

    15 April 2014

    Menlo Park, United States of America

    Meet with... Correlation Ventures https://tess.elixir-europe.org/events/meet-with-correlation-ventures 2014-04-15 01:00:00 UTC 2014-04-15 01:00:00 UTC Janssen Labs Menlo Park, United States of America Menlo Park United States of America Pathology [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • Next Generation Sequencing Conference

    2 - 4 June 2014

    Barcelona, Spain

    Next Generation Sequencing Conference https://tess.elixir-europe.org/events/next-generation-sequencing-conference 2014-06-02 01:00:00 UTC 2014-06-04 01:00:00 UTC ISCB Barcelona, Spain Barcelona Spain Genomics Bioinformatics [] [] [] meetings_and_conferences [] ISCBISCBEvents
  • Meet with... Wellcome Trust

    4 - 5 June 2014

    Menlo Park, United States of America

    Meet with... Wellcome Trust https://tess.elixir-europe.org/events/meet-with-wellcome-trust 2014-06-04 01:00:00 UTC 2014-06-05 01:00:00 UTC Janssen Labs Menlo Park, United States of America Menlo Park United States of America Pharmacology Pathology [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • The 29th Annual Symposium for the Protein Society

    22 - 25 July 2015

    Barcelona, Spain

    The 29th Annual Symposium for the Protein Society https://tess.elixir-europe.org/events/the-29th-annual-symposium-for-the-protein-society 2015-07-22 01:00:00 UTC 2015-07-25 01:00:00 UTC The Protein Society Barcelona, Spain Barcelona Spain Proteomics [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • 2016 Whole-Cell Modeling Summer School

    3 - 8 April 2016

    Barcelona, Spain

    2016 Whole-Cell Modeling Summer School https://tess.elixir-europe.org/events/2016-whole-cell-modeling-summer-school 2016-04-03 01:00:00 UTC 2016-04-08 01:00:00 UTC Barcelona, Spain Barcelona Spain Systems biology Bioinformatics [] [] [] workshops_and_courses [] ISCBOtherEvents
  • NGS ’16 Genome Annotation

    4 - 6 April 2016

    Barcelona, Spain

    NGS ’16 Genome Annotation https://tess.elixir-europe.org/events/ngs-a-16-genome-annotation 2016-04-04 01:00:00 UTC 2016-04-06 01:00:00 UTC Barcelona, Spain Barcelona Spain Genomics Bioinformatics [] [] [] meetings_and_conferences [] ISCBISCBEvents
  • GATK Best Practices for Variant Discovery

    17 - 19 July 2017

    Edinburgh, United Kingdom

    Elixir node event
    GATK Best Practices for Variant Discovery https://tess.elixir-europe.org/events/gatk-best-practices-for-variant-discovery This workshop will focus on the core steps involved in calling variants with the Broad’s Genome Analysis Toolkit, using the Best Practices developed by the GATK team. You will learn why each step is essential to the variant discovery process, what are the operations performed on the data at each step, and how to use the GATK tools to get the most accurate and reliable results out of your dataset. In the course of this workshop, we highlight key functionalities such as the GVCF workflow for joint variant discovery in cohorts, RNAseq-specific processing, and somatic variant discovery using MuTect2. We also preview capabilities of the upcoming GATK version 4, including a new workflow for CNV discovery, and we demonstrate the use of pipelining tools to assemble and execute GATK workflows. 2017-07-17 09:00:00 UTC 2017-07-19 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom Bioinformatics Genomics Edinburgh Genomics Bert Overduin - bert.overduin@ed.ac.uk [] [] workshops_and_courses [] Variant discoveryGenomicsBioinformatics
  • Introduction to ChIP-seq Data Analysis and Visualisation using Ensembl

    23 - 24 November 2017

    Edinburgh, United Kingdom

    Elixir node event
    Introduction to ChIP-seq Data Analysis and Visualisation using Ensembl https://tess.elixir-europe.org/events/introduction-to-chip-seq-data-analysis-and-visualisation-using-ensembl-d125d464-c708-4919-8322-19d50246c22d ChIP-seq (Chromatin ImmunoPrecipitation followed by Sequencing) is a popular high-throughput sequencing assay to identify binding sites of DNA-associated proteins and histone modifications. Determining how proteins interact with DNA and the epigenetic landscape is essential for elucidating the regulation of gene expression. The aim of this workshop is to familiarise the participants with the primary analysis of ChIP-seq data sets by providing a balanced set of lectures and practicals on analysis methodologies. Practicals include publicly available ChIP-seq datasets, processed using widely used and open-source software programs (e.g. FASTQC, BWA, samtools, bedtools, wiggletools, MACS2, MEME, TOMTOM, ngsplot) and visualised on the Ensembl genome browser. 2017-11-23 09:00:00 UTC 2017-11-24 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom EH9 3JN Genomics ChIP-seq Bioinformatics Edinburgh Genomics Bert Overduin - bert.overduin@ed.ac.uk [] [] workshops_and_courses [] BioinformaticsChIP-seqGenomics
  • Linux for Genomics

    1 October 2018

    Edinburgh, United Kingdom

    Elixir node event
    Linux for Genomics https://tess.elixir-europe.org/events/linux-for-genomics-4e98de3e-0102-46ab-9720-22f1122fd31d Genomic studies produce vast amounts of data, usually in the form of very large text files. Linux is particularly suited to working with such files, and is therefore arguably one of the most important tools in a bioinformatician’s toolkit. The Linux command-line enables one to view, filter and manipulate large text files that are difficult or impossible to handle with applications like Word or Excel, write pipelines to perform certain tasks, and run bioinformatics software for which no web interface is available. In this workshop we will first cover the most used Linux commands, followed by a short introduction to several popular command-line tools that were especially developed for genomics as well as file formats commonly used in genomics (BED, FASTA, FASTQ, GFF/GTF, SAM/BAM, VCF). 2018-10-01 09:00:00 UTC 2018-10-01 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom EH9 3JN Genomics Bioinformatics Edinburgh Genomics Donald Dunbar - donald.dunbar@ed.ac.uk [] [] workshops_and_courses [] BioinformaticsGenomicsLinux
  • Introduction to Python for Biologists

    8 - 12 July 2019

    Edinburgh, United Kingdom

    Elixir node event
    Introduction to Python for Biologists https://tess.elixir-europe.org/events/introduction-to-python-for-biologists-d98f6dfb-45c5-4377-bbe9-9e8d30ed086d Python is a dynamic, readable language that is a popular platform for all types of bioinformatics work, from simple one-off scripts to large, complex software projects. This workshop is aimed at complete beginners and assumes no prior programming experience. It gives an overview of the language with an emphasis on practical problem-solving, using examples and exercises drawn from various aspects of bioinformatics work. The workshop is structured so that the parts of the language most useful for bioinformatics are introduced as early as possible, and that students can start writing plausibly-useful programs after the first few sessions. After completing the workshop, students should be in a position to (1) apply the skills they have learned to tackling problems in their own research and (2) continue their Python education in a self-directed way. 2019-07-08 09:00:00 UTC 2019-07-12 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom EH9 3JN Genomics Bioinformatics Edinburgh Genomics Training Team - edge-training@ed.ac.uk [] [] workshops_and_courses [] BioinformaticsGenomicsPython
  • Introduction to RNA-seq Data Analysis

    5 - 7 August 2019

    Edinburgh, United Kingdom

    Elixir node event
    Introduction to RNA-seq Data Analysis https://tess.elixir-europe.org/events/introduction-to-rna-seq-data-analysis-5989e86e-a408-481d-b3c7-5a1413b0e4a6 RNA sequencing (RNA-seq) is quickly becoming the method of choice for transcriptome profiling. Nevertheless, it is a non-trivial task to transform the vast amount of data obtained with high-throughput sequencers into useful information. Thus, RNA-seq data analysis is still a major bottleneck for most researchers in this field. The ability of correctly interpreting RNA-seq results, as well as knowledge on the intrinsic properties of these data, are essential to avoid incorrect experimental designs and the application of inappropriate analysis methodologies. The aim of this workshop is to familiarise researchers with RNA-seq data and to initiate them in the analysis by providing lectures and practicals on analysis methodologies. In the practicals Illumina-generated sequencing data and various widely used software programs will be used. 2019-08-05 09:00:00 UTC 2019-08-07 17:00:00 UTC The King's Buildings, The University of Edinburgh, Edinburgh, United Kingdom The King's Buildings, The University of Edinburgh Edinburgh United Kingdom EH9 3JN RNA-Seq Genomics Bioinformatics Edinburgh Genomics Edinburgh Genomics Training Team - edge-training@ed.ac.uk [] [] workshops_and_courses [] BioinformaticsGenomicsRNA-seq
  • Advances in Computational Biology Conference 2019

    28 - 29 November 2019

    Barcelona, Spain

    Elixir node event
    Advances in Computational Biology Conference 2019 https://tess.elixir-europe.org/events/advances-in-computational-biology-conference-2019 The first **Advances in Computational Biology conference – _Fostering collaboration among women scientists_** will bring together researchers working on systems biology, omics technologies, artificial intelligence and high-performance computing with applications to biology from both the public and private sectors. One of the main purposes of the conference is to **visualize and promote the research done by women scientists** and for this reason, all presenters will be women, although the conference is open to everyone. We want to create a space to foster collaborations between scientists, providing an excellent opportunity to share ideas and build research networks. Topics included: - **Learning from Biological Sequences**: population genomics, evolutionary genomics, systems biology, transcriptomics, sequence analysis - **When Computational Biology meets Medicine**: biomedical applications, mutational landscapes, clinical genomics - **Machines Speeding up Research**: high performance computing, machine learning in the life sciences, imaging data analysis, dynamic simulations and algorithm development Key dates: - Open registration: May 6th, 2019 - Abstract submission opens: May 6th, 2019 - **Abstract submission deadline: July 1st, 2019** - Early bird registration deadline: September 15th, 2019 - Registration deadline: November 1st, 2019 - AdvCompBio Conference: November 28th - 29th, 2019 The programme will include poster and oral presentations, as well as keynotes from leading scientists in the computational biology and high-performance computing fields. The keynote speakers of the conference are: **Christine Orengo**, group leader of Orengo Group at University College London, **Natasa Przulj**, group leader of the Life Sciences – Integrative Computational Network Biology at the Barcelona Supercomputing Center and **Marie-Christine Sawley**, director of the Exascale Lab at Intel. The confirmed chairs of the conference are: **Alison Kennedy**, director of the STFC Hartree Centre, **Janet Kelso**, group leader of the Minerva Research Group for Bioinformatics at the Max Planck Institute for Evolutionary Anthropology, and **Nuria Lopez-Bigas**, leader of the Biomedical Genomics Research Group at the Institute for Research in Biomedicine Barcelona. Furthermore, the participants will have the opportunity to interact personally with female leaders in the fields of IT, academic research and politics that support the conference. The conference is organised by the Bioinfo4Women programme from the Barcelona Supercomputing Center (BSC-CNS) with the collaboration of IMIM-UPF Research Programme on Biomedical Informatics (GRIB), the Spanish National Bioinformatics Institute (INB/ELIXIR-ES) and the Universitat Politècnica de Catalunya (UPC). It is an affiliate conference of the International Society for Computational Biology (ISCB). 2019-11-28 09:00:00 UTC 2019-11-29 17:00:00 UTC La Pedrera, 92, Passeig de Gràcia, Barcelona, Spain La Pedrera, 92, Passeig de Gràcia Barcelona Barcelona Spain Imaging Machine learning Computational biology Computer science Biomedical science Sequence analysis Transcriptomics Evolutionary biology Population genomics Omics Systems biology Bioinformatics [] [] ResearchersPhD studentsPostdoctoral studentsComputer scienceComputational biologistsbioinformaticians meetings_and_conferences [] HPCBioinformaticsComputational BiologyArtificial IntelligenceGenomicsTranscriptomicsSystems biologyPopulation GenomicsEvolutinary genomicsSequence Analysisbiomedical applicationsmutational landscapesclinical genomicsImagingdynamic simulationsalgorithmsmachine learning
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