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  • Using CellProfiler and CellProfiler Analyst to analyse biological images

    15 - 16 December 2016

    Cambridge, United Kingdom

    Elixir node event
    Using CellProfiler and CellProfiler Analyst to analyse biological images https://tess.elixir-europe.org/events/using-cellprofiler-and-cellprofiler-analyst-to-analyse-biological-images Microscopy experiments have proven to be a powerful means of generating information-rich data for biological applications. From small-scale microscopy experiments to time-lapse movies and high-throughput screens, automatic image analysis is more objective and quantitative and less tedious than visual inspection. This course will introduce users to the free open-source image analysis program [CellProfiler](http://cellprofiler.org/) and its companion data exploration program CellProfiler Analyst. We will show how CellProfiler can be used to analyse a variety of types of imaging experiments. We will also briefly discuss the basic principles of supervised machine learning with CellProfiler Analyst in order to score complex and subtle phenotypes. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=1879361&course-title=Using%20CellProfiler%20and%20CellProfiler%20Analyst%20to%20analyse%20biological%20images).'' 2016-12-15 09:30:00 UTC 2016-12-16 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Data visualisation Data mining Biological imaging Bioinformatics University of Cambridge Bioinformatics Training [] Researchers who want to extract quantitative information from microscopy imagesGraduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Using CellProfiler and CellProfiler Analyst to analyse biological images

    13 - 14 December 2017

    Cambridge, United Kingdom

    Elixir node event
    Using CellProfiler and CellProfiler Analyst to analyse biological images https://tess.elixir-europe.org/events/using-cellprofiler-and-cellprofiler-analyst-to-analyse-biological-images-0ecfe90a-5697-48c3-96c4-0d318bb4bcd2 Microscopy experiments have proven to be a powerful means of generating information-rich data for biological applications. From small-scale microscopy experiments to time-lapse movies and high-throughput screens, automatic image analysis is more objective and quantitative and less tedious than visual inspection. This course will introduce users to the free open-source image analysis program [CellProfiler](http://cellprofiler.org/) and its companion data exploration program CellProfiler Analyst. We will show how CellProfiler can be used to analyse a variety of types of imaging experiments. We will also briefly discuss the basic principles of supervised machine learning with CellProfiler Analyst in order to score complex and subtle phenotypes. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=1923396&course-title=Using%20CellProfiler%20and%20CellProfiler%20Analyst%20to%20analyse%20biological%20images).'' 2017-12-13 09:30:00 UTC 2017-12-14 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Data visualisation Data mining Biological imaging Bioinformatics University of Cambridge Bioinformatics Training [] Researchers who want to extract quantitative information from microscopy imagesGraduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Using CellProfiler and CellProfiler Analyst to analyse biological images

    10 - 11 December 2018

    Cambridge, United Kingdom

    Elixir node event
    Using CellProfiler and CellProfiler Analyst to analyse biological images https://tess.elixir-europe.org/events/using-cellprofiler-and-cellprofiler-analyst-to-analyse-biological-images-784b3b6a-5e06-4064-b715-9c596d8b9d43 Microscopy experiments have proven to be a powerful means of generating information-rich data for biological applications. From small-scale microscopy experiments to time-lapse movies and high-throughput screens, automatic image analysis is more objective and quantitative and less tedious than visual inspection. This course will introduce users to the free open-source image analysis program [CellProfiler](http://cellprofiler.org/) and its companion data exploration program CellProfiler Analyst. We will show how CellProfiler can be used to analyse a variety of types of imaging experiments. We will also briefly discuss the basic principles of supervised machine learning with CellProfiler Analyst in order to score complex and subtle phenotypes. The training room is located on the first floor and there is currently no wheelchair or level access available to this level. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=2657149&course-title=Using%20CellProfiler%20and%20CellProfiler%20Analyst%20to%20analyse%20biological%20images).'' 2018-12-10 09:30:00 UTC 2018-12-11 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Data visualisation Data mining Biological imaging Bioinformatics University of Cambridge Bioinformatics Training [] Researchers who want to extract quantitative information from microscopy imagesGraduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Exploring, visualising and analysing proteomics data in R

    24 January 2019

    Cambridge, United Kingdom

    Elixir node event
    Exploring, visualising and analysing proteomics data in R https://tess.elixir-europe.org/events/exploring-visualising-and-analysing-proteomics-data-in-r This course will present a set of R/Bioconductor packages to access, manipulate, visualise and analyse mass spectrometry (MS) and quantitative proteomics data. The training room is located on the first floor and there is currently no wheelchair or level access available to this level. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=2759559&course-title=Exploring%20Visualising%20and%20analysing%20proteomics%20data%20in%20R).'' 2019-01-24 09:30:00 UTC 2019-01-24 17:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Proteomics Data visualisation Biology Bioinformatics University of Cambridge Bioinformatics Training [] The course is targeted to either proteomics practitioners or data analysts/bioinformaticians that would like to learn how to use R to analyse proteomics data. Familiarity with mass spectrometry or proteomics in general is desirablebut not essential as we will walk through a MS typical experiment and data as part of learning about the tools.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
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