Register event
703 events found

Keywords: HDRUK 

and

City: Bogota  or Copenhagen  or Cambridge  or Norwich  or Rotterdam 

  • Analysis of single cell RNA-seq data

    24 February 2016

    Cambridge, United Kingdom

    Elixir node event
    Analysis of single cell RNA-seq data https://tess.elixir-europe.org/events/analysis-of-single-cell-rna-seq-data-6b369e66-a979-400e-adad-d70f7ea137ed Recent technological advances have made it possible to obtain genome-wide transcriptome data from single cells using high-throughput sequencing (scRNA-seq). Even though scRNA-seq makes it possible to address problems that are intractable with bulk RNA-seq data, analysing scRNA-seq is also more challenging. In this course we will be surveying the existing problems as well as the available computational and statistical frameworks available for the analysis of scRNA-seq. Materials for this course can be found [here](http://hemberg-lab.github.io/scRNA.seq.course/index.html). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Analysis%20of%20single%20cell%20RNA-seq%20data_bioinfo-scRNAseq_626698_24.02.2016&CourseName=Analysis%20of%20single%20cell%20RNA-seq%20data&CourseDate=24.02.2016&CourseDuration=2&EventID=1626698).'' 2016-02-24 09:30:00 UTC 2016-02-24 17:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • An Introduction to Solving Biological Problems with Python

    25 - 26 February 2016

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with Python https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-python-de16efd8-8db4-4d58-86ce-28f65628e093 This course provides a practical introduction to the writing of Python programs for the complete novice. Participants are lead through the core aspects of Python illustrated by a series of example programs. Upon completion of the course, attentive participants will be able to write simple Python programs from scratch and to customize more complex code to fit their needs. The Course Web Site providing links to the course materials is [here](http://pycam.github.io). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20Python_bioinfo-python_25-26.02.2016_1572827&CourseName=An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20Python&CourseDate=25-26.02.2016=&CourseDuration=2&EventID=1572827).'' 2016-02-25 09:30:00 UTC 2016-02-26 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Ensembl Bite sized – Gene Regulation March 2016

    2 March 2016

    Cambridge, United Kingdom

    Elixir node event
    Ensembl Bite sized – Gene Regulation March 2016 https://tess.elixir-europe.org/events/ensembl-bite-sized-gene-regulation-march-2016 Work with the Ensembl team to get to grips with the Ensembl browser, accessing regulation data. 2016-03-02 12:00:00 UTC 2016-03-02 12:00:00 UTC European Bioinformatics Institute (EMBL-EBI) - Training Room 2, Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) - Training Room 2 Cambridge United Kingdom CB10 1SD [] Denise Carvalho-Silva [] [] [] [] HDRUK
  • Introduction to Integrative Omics

    7 - 10 March 2016

    Cambridge, United Kingdom

    Elixir node event
    Introduction to Integrative Omics https://tess.elixir-europe.org/events/introduction-to-integrative-omics This course will provide participants with an introduction to methods for working with a number of ‘omics’ data types in a more integrated manner, with an emphasis on data visualisation. 2016-03-07 09:00:00 UTC 2016-03-10 00:00:00 UTC European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) Cambridge United Kingdom CB10 1SD [] Frank O’Donnell [] [] workshops_and_courses [] HDRUK
  • SME Forum 2016

    7 - 8 March 2016

    Cambridge, United Kingdom

    Elixir node event
    SME Forum 2016 https://tess.elixir-europe.org/events/sme-forum-2016 EMBL-EBI’s freely available biological data and services make it easier for small companies to stay focused on innovation. Our annual SME Forum features talks, workshops and opportunities to network with other biomedical and biotechnology R&D professionals. This year, with the support of One Nucleus, we have the great pleasure of conducting our SME Forum in our South Building on the Wellcome Genome Campus. Join us to learn more about how your company can make the most of public molecular data and services. 2016-03-07 09:00:00 UTC 2016-03-08 14:00:00 UTC European Bioinformatics Institute (EMBL-EBI) - Kendrew Lecture Theatre, Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) - Kendrew Lecture Theatre Cambridge United Kingdom CB10 1SD [] Silvia Baudone [] [] [] [] HDRUK
  • An Introduction to Solving Biological Problems with PERL

    10 - 11 March 2016

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with PERL https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-perl-7cdb0fab-ace5-4287-a1ef-9ed6a13893d5 This course is aimed at those new to programming and provides an introduction to programming using Perl. During this course you will learn the basics of the Perl programming language, including how to store data in Perl’s standard data structures such as arrays and hashes, and how to process data using loops, functions, and many of Perl’s built in operators. You will learn how to write and run your own Perl scripts and how to pass options and files to them. The course also covers sorting, regular expressions, references and multi-dimensional data structures. The course will be taught using the online [Learning Perl](http://sofiarobb.com/learning-perl-toc/) materials created by [Sofia Robb](http://stajich.bioinformatics.ucr.edu/members/sofia-robb) of the [University of California Riverside](http://www.ucr.edu/). The course website providing links to the course materials is [here](http://bit.ly/cambridgeperl). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20PERL_bioinfo-perlintro_10-11.03.2016_1572695&CourseName=An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20PERL&CourseDate=1--11.03.2016&CourseDuration=2&EventID=1572695).'' 2016-03-10 09:30:00 UTC 2016-03-11 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Cambridge Science Festival 2016

    10 - 17 March 2016

    Cambridge, United Kingdom

    Elixir node event
    Cambridge Science Festival 2016 https://tess.elixir-europe.org/events/cambridge-science-festival-2016 The 2016 Cambridge Science Festival welcomes everyone to explore and discuss science through talks, hands-on activities, performances, exhibitions, tours and films. This year, the focus of the festival is how we can manage the vast amounts of data we collect and generate to increase our understanding of the world. Here, we highlight events featuring Wellcome Genome Campus staff. 2016-03-10 10:00:00 UTC 2016-03-17 20:00:00 UTC Guildhall, Market Square, Cambridge, Cambridge, United Kingdom Guildhall, Market Square, Cambridge Cambridge United Kingdom CB2 3QJ [] [] [] [] [] HDRUK
  • Using the Ensembl Genome Browser

    14 March 2016

    Cambridge, United Kingdom

    Elixir node event
    Using the Ensembl Genome Browser https://tess.elixir-europe.org/events/using-the-ensembl-genome-browser-21edd0a9-fe37-4dc9-a83f-13c4e051b2ec The [Ensembl Project](http://www.ensembl.org) provides a comprehensive and integrated source of annotation of, mainly vertebrate, genome sequences. This one-day workshop offers a comprehensive practical introduction to the use of the Ensembl genome browser as well as essential background information. This course will focus on the vertebrate genomes in Ensembl, however much of what will be covered is also applicable to the non-vertebrates (plants, bacteria, fungi, metazoa and protists) in Ensembl Genomes. There may be some tools and topics that do not apply to non-vertebrates; if you have any questions about this, please email the Ensembl Outreach Project Leader, [mailto:emily@ebi.ac.uk Emily Perry]. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Using%20the%20Ensembl%20Genome%20Browser_bioinfo-ensbrow_14.03.2016_1614646&CourseName=Using%20the%20Ensembl%20Genome%20Browser&CourseDate=14.03.2016&CourseDuration=1&EventID=1614646).'' 2016-03-14 09:30:00 UTC 2016-03-14 17:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Ensembl Browser Workshop – Cambridge March 2016

    14 March 2016

    Cambridge, United Kingdom

    Elixir node event
    Ensembl Browser Workshop – Cambridge March 2016 https://tess.elixir-europe.org/events/ensembl-browser-workshop-cambridge-march-2016 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2016-03-14 09:30:00 UTC 2016-03-14 09:30:00 UTC University of Cambridge, Cambridge, United Kingdom University of Cambridge Cambridge United Kingdom CB2 3AR [] Denise Carvalho-Silva [] [] [] [] HDRUK
  • Introduction to high-throughput sequencing data analysis

    15 - 18 March 2016

    Cambridge, United Kingdom

    Elixir node event
    Introduction to high-throughput sequencing data analysis https://tess.elixir-europe.org/events/introduction-to-high-throughput-sequencing-data-analysis-72b8595e-dde6-4d4f-ade3-bc86e053fe85 This course provides an introduction to high-throughput sequencing (HTS) data analysis methodologies. Lectures will give insight into how biological knowledge can be generated from RNA-seq, ChIP-seq and DNA-seq experiments and illustrate different ways of analyzing such data. Practicals will consist of computer exercises that will enable the participants to apply statistical methods to the analysis of RNA-seq, ChIP-seq and DNA-seq data under the guidance of the lecturers and teaching assistants. It is aimed at researchers who are applying or planning to apply HTS technologies and bioinformatics methods in their research. The timetable can be found [here''](http://bioinfotraining.bio.cam.ac.uk/postgraduate/specialized/bioinfo-hts). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Introduction%20to%20high-throughput%20sequencing%20data%20analysis_bioinfo-ngs_15-18.03.2016_1614800&CourseName=Introduction%20to%20high-throughput%20sequencing%20data%20analysis&CourseDate=15-18.03.2016&CourseDuration=4&EventID=1614800).'' 2016-03-15 09:30:00 UTC 2016-03-18 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • An Introduction to MATLAB for biologists

    21 - 22 March 2016

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to MATLAB for biologists https://tess.elixir-europe.org/events/an-introduction-to-matlab-for-biologists-0b95fcc9-5f17-4d55-89db-25b74e3232df This course aims to give you an introduction to the basics of Matlab. During the two day course we will use a practical based approach to give you the confidence to start using Matlab in your own work. In particular we will show you how to write your own scripts and functions and how to use pre-written functions. We will also explore the many ways in which help is available to Matlab users. In addition we will cover basic computer programming in Matlab to enable you to write more efficient scripts. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=An%20Introduction%20to%20MATLAB_bioinfo-MATLAB_21-22.03.2016_1572602&CourseName=An%20Introduction%20to%20MATLAB&CourseDate=21-22.03.2016&CourseDuration=2&EventID=1572602).'' 2016-03-21 09:30:00 UTC 2016-03-22 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Ensembl browser workshop – Erasmus MC 2016

    22 - 23 March 2016

    Rotterdam, Netherlands

    Elixir node event
    Ensembl browser workshop – Erasmus MC 2016 https://tess.elixir-europe.org/events/ensembl-browser-workshop-erasmus-mc-2016 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2016-03-22 13:00:00 UTC 2016-03-23 13:00:00 UTC Erasmus MC Rotterdam, Rotterdam, Netherlands Erasmus MC Rotterdam Rotterdam Netherlands 3015 CE [] Helen Sparrow [] [] [] [] HDRUK
  • An Introduction to Solving Biological Problems with R

    4 - 5 April 2016

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with R https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-r-8c4850d0-d647-4722-a898-21a0007bdd64 This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. The course website providing links to the course materials is [here](http://cambiotraining.github.io/r-intro/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20R_bioinfo-rintro_4-5.04.2016_1614521&CourseName=An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20R&CourseDate=4-5.04.2016&CourseDuration=2&EventID=1614521).'' 2016-04-04 08:30:00 UTC 2016-04-05 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Introduction to Next Generation Sequencing (April)

    4 - 7 April 2016

    Cambridge, United Kingdom

    Elixir node event
    Introduction to Next Generation Sequencing (April) https://tess.elixir-europe.org/events/introduction-to-next-generation-sequencing-april This course will provide an introduction to the technology, data analysis, tools and resources for next generation sequencing (NGS) data. 2016-04-04 09:00:00 UTC 2016-04-07 00:00:00 UTC European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) Cambridge United Kingdom CB10 1SD [] Maria Bacadare Goitia [] [] [] [] HDRUK
  • Ensembl Browser Workshop- EMBL-EBI- 5th April 2016

    5 April 2016

    Cambridge, United Kingdom

    Elixir node event
    Ensembl Browser Workshop- EMBL-EBI- 5th April 2016 https://tess.elixir-europe.org/events/ensembl-browser-workshop-embl-ebi-5th-april-2016 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2016-04-05 09:00:00 UTC 2016-04-05 09:00:00 UTC European Bioinformatics Institute (EMBL-EBI) - Training Room 2, Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) - Training Room 2 Cambridge United Kingdom CB10 1SD [] Benjamin Moore [] [] [] [] HDRUK
  • How to get started with sequencing analysis: the metagenomics example

    6 April 2016

    Cambridge, United Kingdom

    Elixir node event
    How to get started with sequencing analysis: the metagenomics example https://tess.elixir-europe.org/events/how-to-get-started-with-sequencing-analysis-the-metagenomics-example A hands-on interactive course that will introduce you to how to analyse genomic sequences in the command line environment. Examples will focus on metagenomics data but the course is suitable to anyone starting to analyze high-throughput sequencing data. This course will be taught by Dr. Adina Howe from Iowa State University. Her [group](http://germslab.org/research/) focuses on integrating traditional microbiology approaches with metagenomics and computational biology as investigative tools to understand environmental microbial populations Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=How%20to%20get%20started%20with%20sequencing%20analysis_bioinfo-metagen_1726439_06.04.2016&CourseName=How%20to%20get%20started%20with%20sequencing%20analysis&CourseDate=06.04.2016&CourseDuration=1&EventID=1726439).'' 2016-04-06 08:30:00 UTC 2016-04-06 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Beginners who have very little background in using the command line and are enthusiastic to learn moreGraduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • An Introduction to Solving Biological Problems with Python

    7 - 8 April 2016

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with Python https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-python-4b0c2143-4416-4b27-ae20-8bceecbba5e4 This course provides a practical introduction to the writing of Python programs for the complete novice. Participants are lead through the core aspects of Python illustrated by a series of example programs. Upon completion of the course, attentive participants will be able to write simple Python programs from scratch and to customize more complex code to fit their needs. The Course Web Site providing links to the course materials is [here](http://pycam.github.io). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20Python_bioinfo-python_7-8.04.2016_1621818&CourseName=An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20Python&CourseDate=7-8.04.2016=&CourseDuration=2&EventID=1621818).'' 2016-04-07 08:30:00 UTC 2016-04-08 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • R object-oriented programming and package development

    11 April 2016

    Cambridge, United Kingdom

    Elixir node event
    R object-oriented programming and package development https://tess.elixir-europe.org/events/r-object-oriented-programming-and-package-development-2271fc07-4222-4fc9-9f8a-2665121382fc The course will teach intermediate R object-oriented programming and how to build a fully functional R package. The [course page](http://logic.sysbiol.cam.ac.uk/teaching/advancedR/) includes slides and handouts; other relevant teaching materials are available [here](http://lgatto.github.io/TeachingMaterial/)) and the sequences example package used as template in the course can be found [here](http://cran.r-project.org/web/packages/sequences/index.html). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=R%20object-oriented%20programming%20and%20package%20development_bioinfo-radv_1572380_11.04.2016&CourseName=R%20object-oriented%20programming%20and%20package%20development&CourseDate=11.04.2016&CourseDuration=1&EventID=1572380).'' 2016-04-11 08:30:00 UTC 2016-04-11 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Ensembl Browser Workshop - Plants, TGAC, April 2016

    12 April 2016

    Norwich, United Kingdom

    Elixir node event
    Ensembl Browser Workshop - Plants, TGAC, April 2016 https://tess.elixir-europe.org/events/ensembl-browser-workshop-plants-tgac-april-2016 Work with the Ensembl Outreach team to get to grips with browsing plant genomes with Ensembl; accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart 2016-04-12 09:30:00 UTC 2016-04-12 09:30:00 UTC The Genome Analysis Centre, Norwich, United Kingdom The Genome Analysis Centre Norwich United Kingdom NR4 7UH [] Helen Sparrow [] [] [] [] HDRUK
  • Ensembl Browser workshop - Microbes, TGAC, April 2016

    13 April 2016

    Norwich, United Kingdom

    Elixir node event
    Ensembl Browser workshop - Microbes, TGAC, April 2016 https://tess.elixir-europe.org/events/ensembl-browser-workshop-microbes-tgac-april-2016 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2016-04-13 09:30:00 UTC 2016-04-13 09:30:00 UTC The Genome Analysis Centre, Norwich, United Kingdom The Genome Analysis Centre Norwich United Kingdom NR4 7UH [] Helen Sparrow [] [] [] [] HDRUK
  • Network Visualisation and Analysis of Biological Data

    14 - 15 April 2016

    Cambridge, United Kingdom

    Elixir node event
    Network Visualisation and Analysis of Biological Data https://tess.elixir-europe.org/events/network-visualisation-and-analysis-of-biological-data This two day course will cover network-based approaches to visualise and analyse complex biological ‘big’ data and model pathway systems. The course will be centred on the use of [BioLayout Express3D](http://www.biolayout.org/), a tool developed between scientists at the University of Edinburgh and EBI over the last 10 years. BioLayout provides rapid and versatile means to explore and integrate very large datasets, providing a stunning interface to visualise the relationships between 10’s of thousands of data points. Originally designed for the analysis of microarray data, it is equally effective in analysing data matrices from other analysis platforms. Day one of the course will introduce principles of network analysis and their use as a generic medium to understand relationships between entities. We will introduce the basics of network visualisation and navigation within BioLayout and principles of correlation analysis of data matrices. We will then explore how data can be explored and clustered within the tool and how you can use the software to rapidly extract meaning from large and complex datasets. Day two will focus on pathway modelling. We will explain how to collate information about a given system of interest from the literature, and to turn this information into a logic-based pathway model. We will then explore how these models can be parametrised and imported into BioLayout where simulations can be run that model the dynamics of these systems under different conditions. For more information see: http://www.virtuallyimmune.org/ A draft agenda can be found [here](http://bioinfotraining.bio.cam.ac.uk/postgraduate/specialized/bioinfo-networks). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Network%20Visualization%20and%20Analysis%20of%20Biological%Data_bioinfo-networks_14-15.04.2016_1689103&CourseName=Network%20Visualization%20and%20Analysis%20of%20Biological%Data&CourseDate=14-15.04.2016&CourseDuration=2&EventID=1689103).'' 2016-04-14 08:30:00 UTC 2016-04-15 15:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Introduction to genome variation analysis using NGS

    18 - 19 April 2016

    Cambridge, United Kingdom

    Elixir node event
    Introduction to genome variation analysis using NGS https://tess.elixir-europe.org/events/introduction-to-genome-variation-analysis-using-ngs-c6fbe10a-2047-47f6-81f7-c03cc98a0b3c This course provides an introduction to the analysis of human genome sequence variation with next generation sequencing data (NGS), including: *an introduction to genetic variation as well as data formats and analysis workflows commonly used in NGS data analysis; *an overview of available analytical tools and discussion of their limitations; and *hands-on experience with common computational workflows for analysing genome sequence variation using bioinformatics and computational genomics approaches. A draft agenda can be found [here](http://bioinfotraining.bio.cam.ac.uk/postgraduate/specialized/bioinfo-var) Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Introduction%20to%20genome%20variation%20analysis%20using%20NGS_bioinfo-var_18-19.04.2016_1572220&CourseName=Introduction%20to%20genome%20variation%20analysis%20using%20NGS&CourseDate=18-19.04.2016&CourseDuration=2&EventID=1572220).'' 2016-04-18 08:30:00 UTC 2016-04-19 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Ensembl Browser Workshop – CRUK Cambridge April 2016

    18 April 2016

    Cambridge, United Kingdom

    Elixir node event
    Ensembl Browser Workshop – CRUK Cambridge April 2016 https://tess.elixir-europe.org/events/ensembl-browser-workshop-cruk-cambridge-april-2016 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and retrieve these data with BioMart. 2016-04-18 09:00:00 UTC 2016-04-18 09:00:00 UTC Cancer Research UK Cambridge Institute, Cambridge, United Kingdom Cancer Research UK Cambridge Institute Cambridge United Kingdom CB2 0RE [] Denise Carvalho-Silva [] [] [] [] HDRUK
  • Advanced RNA-Seq and ChiP-Seq Data Analysis 2016

    18 - 21 April 2016

    Cambridge, United Kingdom

    Elixir node event
    Advanced RNA-Seq and ChiP-Seq Data Analysis 2016 https://tess.elixir-europe.org/events/advanced-rna-seq-and-chip-seq-data-analysis-2016 The aim of this course is to familiarise the participants with advanced data analysis methodologies and provide hands-on training on the latest analytical approaches. 2016-04-18 09:00:00 UTC 2016-04-21 00:00:00 UTC European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) Cambridge United Kingdom CB10 1SD [] Johanna Langrish [] [] workshops_and_courses [] HDRUK
  • CRUK workshop, April 2016

    19 April 2016

    Cambridge, United Kingdom

    Elixir node event
    CRUK workshop, April 2016 https://tess.elixir-europe.org/events/cruk-workshop-april-2016 This course is designed to provide bench-based researchers working in the area of cancer research with an introduction to EMBL-EBI resources relevant to their work. 2016-04-19 09:30:00 UTC 2016-04-19 17:15:00 UTC Cancer Research UK Cambridge Institute, Cambridge, United Kingdom Cancer Research UK Cambridge Institute Cambridge United Kingdom CB2 0RE [] Mark Dunning [] [] [] [] HDRUK
  • Molecular Phylogenetics

    20 - 22 April 2016

    Cambridge, United Kingdom

    Elixir node event
    Molecular Phylogenetics https://tess.elixir-europe.org/events/molecular-phylogenetics-e59d127b-28f9-496b-8225-52f6bd013d78 The course will provide training for bench-based biologists to use molecular data to construct and interpret phylogenies, and test their hypotheses. Delegates will gain hands-on practice of using a variety of programs freely available online and commonly used in molecular studies, interspersed with some lectures. Course timetable is available [here](https://drive.google.com/file/d/0B5BzNXp93Gp5WURyTFRUUGplbzg/view?usp=sharing). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Molecular%20Phylogenetics_bioinfo-phylng_20-22.04.2016_1572213&CourseName=Molecular%20Phylogenetics&CourseDate=20-22.04.2016&CourseDuration=3&EventID=1572213).'' 2016-04-20 08:30:00 UTC 2016-04-22 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Phylogenetics Data visualisation Data mining Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Bioinformatics resources for biomedical researchers

    25 - 26 April 2016

    Cambridge, United Kingdom

    Elixir node event
    Bioinformatics resources for biomedical researchers https://tess.elixir-europe.org/events/bioinformatics-resources-for-biomedical-researchers This workshop is part 1 of two workshops designed to provide an overview of appropriate EMBL-EBI resources for researchers working in the field of biomedical research. This first workshop focuses on protein sequence, classification and interaction resources, whilst also introducing sequence searching. 2016-04-25 09:30:00 UTC 2016-04-26 17:00:00 UTC European Bioinformatics Institute (EMBL-EBI) - Training Room 1, Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) - Training Room 1 Cambridge United Kingdom CB10 1SD [] Sarah Morgan [] [] [] [] HDRUK
  • Statistical Analysis using R

    26 April 2016

    Cambridge, United Kingdom

    Elixir node event
    Statistical Analysis using R https://tess.elixir-europe.org/events/statistical-analysis-using-r-d6115427-4a37-424e-9eb4-41c8882cb111 Statistics are an important part of most modern studies and being able to effectively use a statistical package will help you to understand your results. This course provides an introduction to some statistical techniques through the use of the R language. Topics covered include: Chi2 and Fisher tests, descriptive statistics, t-test, analysis of variance and regression. Students will run analyses using statistical and graphical skills taught during the session. The course manual can be found [here](http://www.bioinformatics.babraham.ac.uk/training/R_statistics_course_manual.pdf). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Statistical%20analysis%20using%20R_bioinfo-statsR_26.04.2016_1572922&CourseName=Statistical%20analysis%20using%20R&CourseDate=26.04.2016&CourseDuration=1&EventID=1572922).'' 2016-04-26 08:30:00 UTC 2016-04-26 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Analysis of high-throughput sequencing data with Bioconductor

    27 - 29 April 2016

    Cambridge, United Kingdom

    Elixir node event
    Analysis of high-throughput sequencing data with Bioconductor https://tess.elixir-europe.org/events/analysis-of-high-throughput-sequencing-data-with-bioconductor-973abd45-4481-47e6-ba79-92ddb7b35875 This course provides an introduction to the tools available through the Bioconductor project for manipulating and analysing high-throughput sequencing (HTS) data. We will present workflows for the analysis of ChIP-Seq and RNA-seq data starting from aligned reads in bam format. We will also describe the various resources available through Bioconductor to annotate and visualize HTS data, which can be applied to any type of sequencing experiment. The course timetable is available [here](https://drive.google.com/file/d/0B5BzNXp93Gp5SWNkOGV2SnFURk0/view?usp=sharing). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Analysis%20of%20High-throughput%20sequencing%20data%20with%20Bioconductor_bioinfo-ngsbioc_27-29.04.2016_1614561&CourseName=Analysis%20of%20High-throughput%20sequencing%20data%20with%20Bioconductor&CourseDate=27-29.04.2016&CourseDuration=3&EventID=1614561).'' 2016-04-27 08:30:00 UTC 2016-04-29 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • BioExcel: addressing training needs for advanced simulations in biomolecular research

    3 - 4 May 2016

    Cambridge, United Kingdom

    Elixir node event
    BioExcel: addressing training needs for advanced simulations in biomolecular research https://tess.elixir-europe.org/events/bioexcel-addressing-training-needs-for-advanced-simulations-in-biomolecular-research The purpose of this workshop is twofold; firstly, it will provide users of three important biomolecular modelling and simulation resources, GROMACS, HADDOCK and CPMD, to learn directly from the developers of these resources and find out about how BioExcel - Europe’s new centre of excellence for BioMolecular Research - will enable users to harness high-performance computing (HPC) to use these tools in a user-friendly environment that does not assume any prior experience of using HPC. 2016-05-03 09:00:00 UTC 2016-05-04 17:30:00 UTC European Bioinformatics Institute (EMBL-EBI) - Training Room 2, Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) - Training Room 2 Cambridge United Kingdom CB10 1SD [] Maria Bacadare Goitia [] [] [] [] HDRUK
Note, this map only displays events that have geolocation information in TeSS.
For the complete list of events in TeSS, click the grid tab.