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678 events found

Keywords: HDRUK 

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  • Network Analysis with Cytoscape and PSICQUIC

    18 November 2015

    Cambridge, United Kingdom

    Elixir node event
    Network Analysis with Cytoscape and PSICQUIC https://tess.elixir-europe.org/events/network-analysis-with-cytoscape-and-psicquic This workshop will guide novice users through the process of analysing interaction networks. 2015-11-18 09:30:00 UTC 2015-11-18 17:00:00 UTC University of Cambridge, Cambridge, United Kingdom University of Cambridge Cambridge United Kingdom CB2 3AR [] Zaria Byer [] [] [] [] HDRUK
  • NGS data analysis course, Pontificia Universidad Javeriana, Bogota, November 2015

    23 - 24 November 2015

    Bogota, Colombia

    Elixir node event
    NGS data analysis course, Pontificia Universidad Javeriana, Bogota, November 2015 https://tess.elixir-europe.org/events/ngs-data-analysis-course-pontificia-universidad-javeriana-bogota-november-2015 This course is organised for professionals in life sciences and biomedical sciences, preferably researchers or graduate students who are conducting or planning to conduct investigations that require the bioinformatic analysis of data from omics technologies of high throughput sequencing or next generation (NGS). 2015-11-23 16:15:00 UTC 2015-11-24 16:15:00 UTC Pontificia Universidad Javeriana, Bogota, Colombia Pontificia Universidad Javeriana Bogota Colombia [] Maria Bacadare Goitia [] [] [] [] HDRUK
  • Biological data analysis using InterMine

    26 November 2015

    Cambridge, United Kingdom

    Elixir node event
    Biological data analysis using InterMine https://tess.elixir-europe.org/events/biological-data-analysis-using-intermine [InterMine](http://intermine.org/) is a freely available data warehouse and analysis software system that has been used to create a suite of databases for the analysis of large and complex biological data sets. InterMine-based data analysis platforms are available for many organisms including [mouse](http://www.mousemine.org/mousemine/begin.do), [rat](http://ratmine.mcw.edu/ratmine/begin.do), [budding yeast](http://yeastmine.yeastgenome.org/yeastmine/begin.do), [plants](https://apps.araport.org/thalemine/begin.do), [nematodes](http://www.wormbase.org/tools/wormmine/begin.do), [fly](http://www.flymine.org/), [zebrafish](http://www.zebrafishmine.org/) and more recently [human](http://www.humanmine.org/). The InterMine web interface offers sophisticated query and visualisation tools, as well as comprehensive web services for bioinformaticians. Genomic and proteomic data within InterMine databases includes pathways, gene expression, interactions, sequence variants, GWAS, regulatory data and protein expression. We have recently re-designed the InterMine interface to provide a more intuitive user-experience. This workshop will provide an overview of key features of the new interface and how this can be used to interrogate genomic and proteomic data. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Biological%20data%20analysis%20using%20InterMine_bioinfo-intermine_26.11.2015_1539952&CourseName=Biological%20data%20analysis%20using%20InterMine&CourseDate=26.11.2015&CourseDuration=0.5&EventID=1539952).'' 2015-11-26 09:30:00 UTC 2015-11-26 12:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] The course is aimed at bench biologists who need to analyse their own data against large biological datasetsor who need to search against several biological datasets to gain knowledge of a gene/gene setbiological process or function. The course may also be of interest to bioinformaticians who wish to familiarise themselves with the InterMine suite of databasesalthough the webservices will not be covered in detail.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Ensembl Browser workshop, Cambridge, Nov 2015

    27 November 2015

    Cambridge, United Kingdom

    Elixir node event
    Ensembl Browser workshop, Cambridge, Nov 2015 https://tess.elixir-europe.org/events/ensembl-browser-workshop-cambridge-nov-2015 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2015-11-27 09:00:00 UTC 2015-11-27 00:00:00 UTC University of Cambridge, Cambridge, United Kingdom University of Cambridge Cambridge United Kingdom CB2 3AR [] Gabriella Rustici [] [] [] [] HDRUK
  • Using the Ensembl Genome Browser

    27 November 2015

    Cambridge, United Kingdom

    Elixir node event
    Using the Ensembl Genome Browser https://tess.elixir-europe.org/events/using-the-ensembl-genome-browser-b763c62e-9dff-40c2-b9bf-82369f4a1911 The [Ensembl Project](http://www.ensembl.org) provides a comprehensive and integrated source of annotation of, mainly vertebrate, genome sequences. This 1-day workshop offers participants the possibility of gaining hands-on experience in the use of the Ensembl genome browser but also provides them with the necessary background information. This course will focus on the vertebrate genomes in Ensembl, however much of what will be covered is also applicable to the non-vertebrates (plants, bacteria, fungi, metazoa and protists) in Ensembl Genomes. There may be some tools and topics that do not apply to non-vertebrates; if you have any questions about this, please email the Ensembl Outreach Project Leader, [mailto:emily@ebi.ac.uk Emily Perry]. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Using%20the%20Ensembl%20Genome%20Browser_bioinfo-ensbrow_2015.11.27_1528909&CourseName=Using%20the%20Ensembl%20Genome%20Browser&CourseDate=2015.11.27&CourseDuration=1&EventID=1528909).'' 2015-11-27 09:30:00 UTC 2015-11-27 17:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] The workshop is primarily targeted at wetlab researchersand we customise the course for species of interest and to include total beginners to our browser up through frequent usersGraduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Analysis of high-throughput sequencing data with Bioconductor

    30 November - 2 December 2015

    Cambridge, United Kingdom

    Elixir node event
    Analysis of high-throughput sequencing data with Bioconductor https://tess.elixir-europe.org/events/analysis-of-high-throughput-sequencing-data-with-bioconductor This course provides an introduction to the tools available through the Bioconductor project for manipulating and analysing high-throughput sequencing (HTS) data. We will present workflows for the analysis of ChIP-Seq and RNA-seq data starting from aligned reads in bam format. We will also describe the various resources available through Bioconductor to annotate and visualize HTS data, which can be applied to any type of sequencing experiment. The course timetable is available [here](https://drive.google.com/file/d/0B5BzNXp93Gp5b1VHYS1ZQUl5RmM/view?usp=sharing). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Analysis%20of%20High-throughput%20sequencing%20data%20with%20Bioconductor_bioinfo-ngsbioc_30.11-02.12.2015_1528113&CourseName=Analysis%20of%20High-throughput%20sequencing%20data%20with%20Bioconductor&CourseDate=30.11-02.12.2015&CourseDuration=3&EventID=1528113).'' 2015-11-30 09:30:00 UTC 2015-12-02 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Exploiting Metagenomics Approaches in Life Science Research

    1 - 3 December 2015

    Cambridge, United Kingdom

    Elixir node event
    Exploiting Metagenomics Approaches in Life Science Research https://tess.elixir-europe.org/events/exploiting-metagenomics-approaches-in-life-science-research This course will provide a broad introduction to the field of metagenomics, including bioinformatics approaches, downstream analyses, and the use of publicly available resources and tools. 2015-12-01 09:00:00 UTC 2015-12-03 00:00:00 UTC European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) Cambridge United Kingdom CB10 1SD [] Frank O’Donnell [] [] [] [] HDRUK
  • Bioinformatics resources for exploring disease related data

    3 December 2015

    Cambridge, United Kingdom

    Elixir node event
    Bioinformatics resources for exploring disease related data https://tess.elixir-europe.org/events/bioinformatics-resources-for-exploring-disease-related-data This workshop will introduce students to EMBL-EBI, the databases and services it offers, and basic concepts in bioinformatics that will be of use to their disease related research work. It will explain the role of the EBI in curating and sharing biological data with scientists around the world and introduce basics for locating relevant data and information of interest. Sessions with trainers from [Ensembl](http://www.ensembl.org/), [ArrayExpress](https://www.ebi.ac.uk/arrayexpress/) and the [GWAS catalog](https://www.ebi.ac.uk/gwas/) will introduce practical skills in browsing genes and variation in a genomic context, in exploring SNP-trait associations and will show how further understanding can be gained on the location and level of gene expression across the body. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics%20resources%20for%20exploring%20disease%20related%20data_bioinfo-resdisease_3.12.2015_1650733&CourseName=Bioinformatics%20resources%20for%20exploring%20disease%20related%20data&CourseDate=3.12.2015&CourseDuration=1&EventID=1650733).'' 2015-12-03 09:30:00 UTC 2015-12-03 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] This workshop is aimed at students on the Rare Diseases and Experimental Medicine MPhil courses at the University of Cambridge. Students from the wider clinical sciences group are also able to attend subject to space being available.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Bioinformatics resources for exploring disease related data

    3 December 2015

    Cambridge, United Kingdom

    Elixir node event
    Bioinformatics resources for exploring disease related data https://tess.elixir-europe.org/events/bioinformatics-resources-for-exploring-disease-related-data-4b320d0b-ad17-4234-abac-41d8c94a4135 This workshop will introduce students to EMBL-EBI, the databases and services it offers, and basic concepts in bioinformatics that will be of use to their research work. 2015-12-03 09:30:00 UTC 2015-12-03 16:30:00 UTC University of Cambridge, Cambridge, United Kingdom University of Cambridge Cambridge United Kingdom CB2 3AR [] Gabriella Rustici [] [] [] [] HDRUK
  • Introduction to Scientific Figure Design - Webcast Event

    4 December 2015

    Cambridge, United Kingdom

    Elixir node event
    Introduction to Scientific Figure Design - Webcast Event https://tess.elixir-europe.org/events/introduction-to-scientific-figure-design-webcast-event This course provides a practical guide to producing figures for use in reports and publications. It is a wide ranging course which looks at how to design figures to clearly and fairly represent your data, the practical aspects of graph creation, the allowable manipulation of bitmap images and compositing and editing of final figures. The course will use a number of different open source software packages and is illustrated with a number of example figures adapted from common analysis tools. Further information and access to the course materials is [here](http://www.bioinformatics.babraham.ac.uk/training.html#figuredesign). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Introduction%20to%20Scientific%20Figure%20Design%20-%20webcast%20event_bioinfo-figdeswe_4.12.2015_1634028&CourseName=Introduction%20to%20Scientific%20Figure%20Design-%20webcast%20event&CourseDate=4.12.2015&CourseDuration=1&EventID=1634028).'' 2015-12-04 09:30:00 UTC 2015-12-04 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Introduction to Scientific Figure Design

    4 December 2015

    Cambridge, United Kingdom

    Elixir node event
    Introduction to Scientific Figure Design https://tess.elixir-europe.org/events/introduction-to-scientific-figure-design This course provides a practical guide to producing figures for use in reports and publications. It is a wide ranging course which looks at how to design figures to clearly and fairly represent your data, the practical aspects of graph creation, the allowable manipulation of bitmap images and compositing and editing of final figures. The course will use a number of different open source software packages and is illustrated with a number of example figures adapted from common analysis tools. Further information and access to the course materials is [here](http://www.bioinformatics.babraham.ac.uk/training.html#figuredesign). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Introduction%20to%20Scientific%20Figure%20Design_bioinfo-figdes_4.12.2015_1503983&CourseName=Introduction%20to%20Scientific%20Figure%20Design&CourseDate=4.12.2015&CourseDuration=1&EventID=1503983).'' 2015-12-04 09:30:00 UTC 2015-12-04 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Proteomics Bioinformatics

    6 - 11 December 2015

    Cambridge, United Kingdom

    Elixir node event
    Proteomics Bioinformatics https://tess.elixir-europe.org/events/proteomics-bioinformatics-d6f30d02-58f5-4a4b-8cf6-ed9f585fe1bc The course will allow participants to take raw data from a proteomics experiment and analyse it; from MS spectra, to identifying peptides and finally to lists of protein identifiers that can be analysed further using a wide range of resources. 2015-12-06 09:00:00 UTC 2015-12-11 00:00:00 UTC European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) Cambridge United Kingdom CB10 1SD [] Yvonne Thornton [] [] [] [] HDRUK
  • Semantic Web Applications and Tools for the Life Sciences: SWAT4LS International

    7 - 10 December 2015

    Cambridge, United Kingdom

    Elixir node event
    Semantic Web Applications and Tools for the Life Sciences: SWAT4LS International https://tess.elixir-europe.org/events/semantic-web-applications-and-tools-for-the-life-sciences-swat4ls-international SWAT4LS is a two-day international conference that brings together researchers in diverse areas including eHealth, medical and clinical informatics, bioinformatics, cheminformatics, drug discovery, drug safety, systems biology, medical physics, data science and biocomputing to discuss goals and real experiences in the application of Semantic-Web and Linked-Data technologies to challenges in healthcare and life sciences. 2015-12-07 09:15:00 UTC 2015-12-10 17:00:00 UTC University of Cambridge, Cambridge, United Kingdom University of Cambridge Cambridge United Kingdom CB2 3AR [] [] [] [] [] HDRUK
  • Image Analysis for Biologists

    7 - 9 December 2015

    Cambridge, United Kingdom

    Elixir node event
    Image Analysis for Biologists https://tess.elixir-europe.org/events/image-analysis-for-biologists This course will focus on computational methods for analysing cellular images and extracting quantitative data from them. The aim of this course is to familiarise the participants with computational image analysis methodologies, and to provide hands-on training in running quantitative analysis pipelines. On day 1 we will introduce principles of image processing and analysis, giving an overview of commonly used algorithms through a series of talks and practicals based on Fiji, an extensible open source software package. On day 2, we will focus on machine learning and computer vision for the analysis of images in cell biology. We will introduce the methodology in a series of lectures and show their application in the hands-on session. These practical sessions will be based on [CellCognition](http://www.cellcognition.org/), a tool for the analysis of live cell imaging data. On day 3, we will describe the open [Icy platform](http://icy.bioimageanalysis.org/) developed at the Institut Pasteur. Icy is a next-generation, user-friendly software offering powerful acquisition, visualization, annotation and analysis algorithms for 5D bioimaging data, together with unique automation/scripting capabilities (notably via its graphical programming interface) and tight integration with existing software (e.g. ImageJ, Matlab, Micro-Manager). The timetable can be found [here](https://drive.google.com/file/d/0B5BzNXp93Gp5MnBPU0RKOV9TOEU/view?usp=sharing). This event is sponsored by the [Systems Microscopy NoE](http://www.systemsmicroscopy.eu/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Image%20Analysis%20for%20Biologists%20_7-9.12.2015_1544771&CourseName=Image%20Analysis%20for%20Biologists&CourseDate=7-9.12.2015&CourseDuration=3&EventID=1544771).'' 2015-12-07 09:30:00 UTC 2015-12-09 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Researchers who are applying or planning to apply image analysis in their researchGraduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Introduction to RNA-seq and ChIP-seq data analysis

    10 - 11 December 2015

    Cambridge, United Kingdom

    Elixir node event
    Introduction to RNA-seq and ChIP-seq data analysis https://tess.elixir-europe.org/events/introduction-to-rna-seq-and-chip-seq-data-analysis The aim of this course is to familiarize the participants with the primary analysis of datasets generated through two popular high-throughout sequencing (HTS) assays: ChIP-seq and RNA-seq. This course starts with a brief introduction to the transition from capillary to high-throughput sequencing (HTS) and discusses quality control issues, which are common among all HTS datasets. Next, we will present the alignment step and how it differs between the two analysis workflows. Finally, we focus on dataset specific downstream analysis, including peak calling and motif analysis for ChIP-seq and quantification of expression, transcriptome assembly and differential expression analysis for RNA-seq. The timetable for this event can be found [here.](https://drive.google.com/file/d/0B5BzNXp93Gp5LS1ILUNXZzRMa2c/view?usp=sharing) Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Introduction%20to%20RNA-seq%20and%20ChIP-seq%20data%20analysis_bioinfo-RNA-seq_10-11.12.2015_1544785&CourseName=Introduction%20to%20RNA-seq%20and%20ChIP-seq%20data%20analysis&CourseDate=10-11.12.2015&CourseDuration=2&EventID=1544785).'' 2015-12-10 09:30:00 UTC 2015-12-11 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • EMBL-EBI: Transcriptomics Data and Tools

    15 December 2015

    Cambridge, United Kingdom

    Elixir node event
    EMBL-EBI: Transcriptomics Data and Tools https://tess.elixir-europe.org/events/embl-ebi-transcriptomics-data-and-tools This workshop will give an introduction to the functional genomics resources provided by EMBL-EBI and hands-on practical experience of searching and accessing appropriate data and information. The session will also cover data submission to [ArrayExpress](https://www.ebi.ac.uk/arrayexpress/) using Annotare. Also note: This event is part of a series of short introductions focusing on EMBL-EBI resources. If you want to learn more about these separate training events, see the Related Courses section below. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=bioinfo-ebitrans_EMBL-EBI:-%20Transcriptomics%20Data%20and%20Tools_15.12.2015_1393017&CourseName=EMBL-EBI:%20Transcriptomics%20Data%20and%20Tools&CourseDate=15.12.2015&CourseDuration=1&EventID=1393017).'' 2015-12-15 09:30:00 UTC 2015-12-15 17:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] This workshop is aimed at researchers who wish to use and submit functional genomics data. This workshop will not however cover the analysis of such data.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Transcriptomics Data and Tools

    15 December 2015

    Cambridge, United Kingdom

    Elixir node event
    Transcriptomics Data and Tools https://tess.elixir-europe.org/events/transcriptomics-data-and-tools This workshop will give an introduction to the functional genomics resources provided by EMBL-EBI and hands-on practical experience of searching and accessing appropriate data and information. 2015-12-15 09:30:00 UTC 2015-12-15 17:00:00 UTC University of Cambridge, Cambridge, United Kingdom University of Cambridge Cambridge United Kingdom CB2 3AR [] Zaria Byer [] [] [] [] HDRUK
  • An Introduction to Solving Biological Problems with R

    16 - 17 December 2015

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with R https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-r-68bca1a2-d4da-4a66-8888-f964879c3196 This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. The course website providing links to the course materials is [here](http://cambiotraining.github.io/r-intro/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20R_bioinfo-rintro_16-17.12.2015_1568450&CourseName=An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20R&CourseDate=16-17.12.2015&CourseDuration=2&EventID=1568450).'' 2015-12-16 09:30:00 UTC 2015-12-17 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Ensembl Browser Workshop I – Cambridge, Jan 2016

    15 January 2016

    Cambridge, United Kingdom

    Elixir node event
    Ensembl Browser Workshop I – Cambridge, Jan 2016 https://tess.elixir-europe.org/events/ensembl-browser-workshop-i-cambridge-jan-2016 Work with the Ensembl Outreach team to get to grips with the Ensembl browser. 2016-01-15 13:00:00 UTC 2016-01-15 13:00:00 UTC University of Cambridge, Cambridge, United Kingdom University of Cambridge Cambridge United Kingdom CB2 3AR [] Denise Carvalho-Silva [] [] [] [] HDRUK
  • Ensembl Browser Workshop II – Cambridge, Jan 2016

    15 January 2016

    Cambridge, United Kingdom

    Elixir node event
    Ensembl Browser Workshop II – Cambridge, Jan 2016 https://tess.elixir-europe.org/events/ensembl-browser-workshop-ii-cambridge-jan-2016 Work with the Ensembl Outreach team to get to grips with the Ensembl browser. 2016-01-15 15:00:00 UTC 2016-01-15 15:00:00 UTC University of Cambridge, Cambridge, United Kingdom University of Cambridge Cambridge United Kingdom CB2 3AR [] Denise Carvalho-Silva [] [] [] [] HDRUK
  • Ensembl Browser Workshop III – Cambridge, Jan 2016

    19 January 2016

    Cambridge, United Kingdom

    Elixir node event
    Ensembl Browser Workshop III – Cambridge, Jan 2016 https://tess.elixir-europe.org/events/ensembl-browser-workshop-iii-cambridge-jan-2016 Work with the Ensembl Outreach team to get to grips with the Ensembl browser. 2016-01-19 13:00:00 UTC 2016-01-19 13:00:00 UTC University of Cambridge, Cambridge, United Kingdom University of Cambridge Cambridge United Kingdom CB2 3AR [] Denise Carvalho-Silva [] [] [] [] HDRUK
  • Ensembl Browser Workshop IV – Cambridge, Jan 2016

    19 January 2016

    Cambridge, United Kingdom

    Elixir node event
    Ensembl Browser Workshop IV – Cambridge, Jan 2016 https://tess.elixir-europe.org/events/ensembl-browser-workshop-iv-cambridge-jan-2016 Work with the Ensembl Outreach team to get to grips with the Ensembl browser. 2016-01-19 15:00:00 UTC 2016-01-19 15:00:00 UTC University of Cambridge, Cambridge, United Kingdom University of Cambridge Cambridge United Kingdom CB2 3AR [] Denise Carvalho-Silva [] [] [] [] HDRUK
  • Ensembl API Workshops, EBI, Jan 2016

    25 - 28 January 2016

    Cambridge, United Kingdom

    Elixir node event
    Ensembl API Workshops, EBI, Jan 2016 https://tess.elixir-europe.org/events/ensembl-api-workshops-ebi-jan-2016 Work with the Ensembl developers to master the Ensembl Perl APIs and flexibly access genome-wide data, such as genes, variants, regulatory features, homologues and alignments. 2016-01-25 09:30:00 UTC 2016-01-28 17:00:00 UTC European Bioinformatics Institute (EMBL-EBI) - Training Room 2, Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) - Training Room 2 Cambridge United Kingdom CB10 1SD [] Emily Perry [] [] [] [] HDRUK
  • Analysis of mapped NGS data with SeqMonk

    3 February 2016

    Cambridge, United Kingdom

    Elixir node event
    Analysis of mapped NGS data with SeqMonk https://tess.elixir-europe.org/events/analysis-of-mapped-ngs-data-with-seqmonk-43412e62-e3fc-4434-a56e-41cec9577dbf [SeqMonk](http://www.bioinformatics.babraham.ac.uk/projects/seqmonk/) is a graphical program for the visualisation and analysis of large mapped sequencing datasets such as ChIP-Seq, RNA-Seq, and BS-Seq. The program allows you to view your reads against an annotated genome and to quantitate and filter your data to let you identify regions of interest. It is a friendly way to explore and analysis very large datasets. This course provides an introduction to the main features of SeqMonk and will run through the analysis of a couple of different datasets to show what sort of analysis options it provides. Further information is available [here](http://www.bioinformatics.babraham.ac.uk/training.html#seqmonk). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Analysing%20mapped%20NGS%20data%20with%20SeqMonk_bioinfo-seqmonk_03.02.2016_1572361&CourseName=Analysing%20mapped%20NGS%20data%20with%20SeqMonk&CourseDate=03.02.2016&CourseDuration=1&EventID=1572361).'' 2016-02-03 09:30:00 UTC 2016-02-03 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR RNA-Seq Exome sequencing Data mining Data visualisation ChIP-seq Bioinformatics University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Ensembl Browser Workshop – Hinxton Feb 2016

    3 February 2016

    Cambridge, United Kingdom

    Elixir node event
    Ensembl Browser Workshop – Hinxton Feb 2016 https://tess.elixir-europe.org/events/ensembl-browser-workshop-hinxton-feb-2016 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and retrieve these data with BioMart. 2016-02-03 14:15:00 UTC 2016-02-03 16:30:00 UTC European Bioinformatics Institute (EMBL-EBI) - Training Room 1, Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) - Training Room 1 Cambridge United Kingdom CB10 1SD [] Denise Carvalho-Silva [] [] [] [] HDRUK
  • Bioinformatics resources for protein biology

    9 - 11 February 2016

    Cambridge, United Kingdom

    Elixir node event
    Bioinformatics resources for protein biology https://tess.elixir-europe.org/events/bioinformatics-resources-for-protein-biology New for 2016, we present a series of three one-day workshops to introduce you to data resources and tools developed by EMBL-EBI that can help you in your protein studies. 2016-02-09 09:15:00 UTC 2016-02-11 00:15:00 UTC European Bioinformatics Institute (EMBL-EBI) - Training Room 1, Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) - Training Room 1 Cambridge United Kingdom CB10 1SD [] Charlotte Pearton [] [] [] [] HDRUK
  • EMBO Practical Course on Metabolomics Bioinformatics for Life Scientists

    14 - 19 February 2016

    Cambridge, United Kingdom

    Elixir node event
    EMBO Practical Course on Metabolomics Bioinformatics for Life Scientists https://tess.elixir-europe.org/events/embo-practical-course-on-metabolomics-bioinformatics-for-life-scientists This course will provide an overview of key issues that affect metabolomics studies, handling dataset and procedures for the analysis of metabolomics data using bioinformatics tools. 2016-02-14 09:00:00 UTC 2016-02-19 00:00:00 UTC European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) Cambridge United Kingdom CB10 1SD [] Maria Bacadare Goitia [] [] workshops_and_courses [] HDRUK
  • Addressing the skills gaps in research infrastructure management and leadership

    16 - 17 February 2016

    Cambridge, United Kingdom

    Elixir node event
    Addressing the skills gaps in research infrastructure management and leadership https://tess.elixir-europe.org/events/addressing-the-skills-gaps-in-research-infrastructure-management-and-leadership The purpose of this workshop is to seek input on training needs for the management and leadership of research infrastructures. This will inform the design of a new curriculum aimed at the managerial and leadership of European Research Infrastructures. This workshop is being organised back-to-back with a related workshop on 'Addressing the skills gaps in technical operation of biomedical research infrastructures'. You are very welcome to register for both workshops. 2016-02-16 12:00:00 UTC 2016-02-17 12:30:00 UTC European Bioinformatics Institute (EMBL-EBI) - Wellcome Trust Conference Centre, Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) - Wellcome Trust Conference Centre Cambridge United Kingdom CB10 1SD [] Johanna Langrish [] [] [] [] HDRUK
  • Addressing the skills gaps in technical operation of biomedical research infrastructures

    17 - 18 February 2016

    Cambridge, United Kingdom

    Elixir node event
    Addressing the skills gaps in technical operation of biomedical research infrastructures https://tess.elixir-europe.org/events/addressing-the-skills-gaps-in-technical-operation-of-biomedical-research-infrastructures The purpose of this workshop is to seek input on training needs for the technical operators of biomedical science research infrastructures. This will help to ensure that CORBEL’s training plans meet the needs of technical operators in your research infrastructure, especially with regards to data management, user access, ethical, legal and social implications, and innovation. This workshop is being organised back-to-back with a related workshop on 'Addressing the skills gaps in research infrastructure management and leadership'. You are very welcome to register for both workshops. 2016-02-17 12:30:00 UTC 2016-02-18 12:00:00 UTC European Bioinformatics Institute (EMBL-EBI) - Wellcome Trust Conference Centre, Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) - Wellcome Trust Conference Centre Cambridge United Kingdom CB10 1SD [] Johanna Langrish [] [] [] [] HDRUK
  • An Introduction to Solving Biological Problems with R

    18 - 19 February 2016

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with R https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-r-4c7b1008-cd10-4a8e-8c33-bb237def655e This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. The course website providing links to the course materials is [here](http://cambiotraining.github.io/r-intro/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20R_bioinfo-rintro_18-19.02.2016_1572428&CourseName=An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20R&CourseDate=18-19.02.2016&CourseDuration=2&EventID=1572428).'' 2016-02-18 09:30:00 UTC 2016-02-19 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
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