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5 events found

Content provider: VIB Bioinformatics Core 

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City: Bogota  or Cartagena  or London  or Amsterdam UMC (location AMC)  or tbd  or Gent  or Oeiras  or Leuven  or Ghent 

  • Introduction to Protein Structure Analysis

    23 April 2021

    Ghent, Belgium

    Elixir node event
    Introduction to Protein Structure Analysis https://tess.elixir-europe.org/events/introduction-to-protein-structure-analysis-9fed44a9-51ab-4c2c-b04e-0a467222c2ad Get to know the data generated from protein structure determination experiments (high-resolution NMR spectroscopy, X-ray crystallography, electron microscopy, ...) and where to get it. Display protein structure data and compare structures, through the use of Yasara. Create high-quality graphical representations of the structures. Calculate the effect of mutations on the stability of your protein. 2021-04-23 09:00:00 UTC 2021-04-23 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []
  • Introduction to Git & GitHub

    11 May 2021

    Ghent, Belgium

    Elixir node event
    Introduction to Git & GitHub https://tess.elixir-europe.org/events/introduction-to-git-github-73610533-f1f3-4840-bfd3-406c9a90f33f Get you started with Git from zero (note that if you already use Git, this workshop will be too basic for you). We'll explore Git on the command-line and its interaction with GitHub.  Introduction, set-up & configurations Working locally: Create a repository, clone, edit, staging commits, commit & push Working with your history & logs Working in a project: Forking, branching & pull requests How to version control your code in Rstudio with GitHub During the workshop we also briefly discuss how you can setup a collaboration project.   2021-05-11 09:00:00 UTC 2021-05-11 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []
  • Introduction to the analysis of NGS data, online

    21 May - 4 June 2021

    Leuven, Belgium

    Elixir node event
    Introduction to the analysis of NGS data, online https://tess.elixir-europe.org/events/introduction-to-the-analysis-of-ngs-data-online-1972b955-6863-42f5-887c-cd6090b1b227 This training is an introduction to a series of trainings on the analysis of Next Generation Sequencing data. This training is intended for newbies to the field and will teach them all background knowledge required to successfully complete the advanced NGS analysis trainings. To this end the training will give an overview of: - The Illumina platform - NGS data formats and file handling - Quality control of NGS data - Mapping of NGS data - Supporting IT: Galaxy and GenePattern platform 2021-05-21 09:00:00 UTC 2021-06-04 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Using MOFA for integration of omics data, online

    25 - 27 May 2021

    Gent, Belgium

    Elixir node event
    Using MOFA for integration of omics data, online https://tess.elixir-europe.org/events/using-mofa-for-integration-of-omics-data-online Participants can analyze their own data in the course. Both bulk and single cell applications will be discussed.  What kind of preprocessing of the data is required for MOFA? How to train MOFA on a multi-omic data set? How to interpret the MOFA factors by their loadings, using gene set enrichment or sample ordination? How to use MOFA for downstream analyses including regression, classification or clustering? How to impute missing values with MOFA? How to select the number of factors and compare different MOFA fits? 2021-05-25 09:00:00 UTC 2021-05-27 00:00:00 UTC VIB Bioinformatics Core iGent, Gent, Belgium iGent Gent Belgium 9052 [] [] [] [] [] []
  • Analysis of 16S rRNA metagenomic experiments, online

    14 - 16 June 2021

    Leuven, Belgium

    Elixir node event
    Analysis of 16S rRNA metagenomic experiments, online https://tess.elixir-europe.org/events/analysis-of-16s-rrna-metagenomic-experiments-online Processing and statistical analysis of 16S rRNA metagenomic experiments using R & Lotus pipeline. The following analytical steps from raw data to communicable results will be on the programme: - Preparation of sequencing data, read filtering, data cleaning - Data normalization - Numerical ecology: Clustering, Ordination, Diversity, Modelling - Univariate & Multivariate Statistics - Biological interpretation 2021-06-14 09:00:00 UTC 2021-06-16 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []

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