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  • Basic statistics in R

    7 - 21 October 2019

    Leuven, Belgium

    Elixir node event
    Basic statistics in R https://tess.elixir-europe.org/events/basic-statistics-in-r-011ad5b2-0f63-42b2-b89a-164c5e271d37 Get an idea of what R and Rstudio is Use R to handle data: creating, reading, reformatting and writing data Use R to create graphics Use basic statistical techniques in R : normality tests, t-tests, wilcoxon tests, chi square tests, correlations, survival analysis... Write and use R scripts 2019-10-07 09:00:00 UTC 2019-10-21 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • EMBL-EBI Workshop: Bioinformatics Resources for Chemical and Molecular Biology

    14 - 15 October 2019

    Dortmund, Germany

    Elixir node event
    EMBL-EBI Workshop: Bioinformatics Resources for Chemical and Molecular Biology https://tess.elixir-europe.org/events/embl-ebi-workshop-bioinformatics-resources-for-chemical-and-molecular-biology This workshop will explore bioinformatics data resources related to the fields of biological and chemical physiology. 2019-10-14 09:00:00 UTC 2019-10-15 17:30:00 UTC Max Planck Institute of Molecular Physiology, Dortmund, Germany Max Planck Institute of Molecular Physiology Dortmund Germany 44227 [] Lucia Sironi [] [] [] [] HDRUK
  • NBIS Course: R programming for Life Scientists

    11 - 16 November 2019

    Uppsala, Sweden

    Elixir node event
    NBIS Course: R programming for Life Scientists https://tess.elixir-europe.org/events/nbis-course-pre-r-programming-for-life-scientists More information will follow contact: education@nbis.se 2019-11-11 09:00:00 UTC 2019-11-16 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • NBIS Course: R programming for Life Scientists

    11 - 16 November 2019

    Uppsala, Sweden

    Elixir node event
    NBIS Course: R programming for Life Scientists https://tess.elixir-europe.org/events/nbis-course-r-programming-for-life-scientists #training #url: https://nbisweden.github.io/workshop-r-1911/ 2019-11-11 - 2019-11-15, Course | Uppsala R programming foundations for Life Science Links: Course: https://nbisweden.github.io/workshop-r-1911/ Registration form: https://squery.typeform.com/to/XMwVk1  The course covers fundamental concepts of programming and software design focusing on programming in R. We will go through various aspects of R scripting emphasizing the parts useful for life scientists. After introductory lectures on good programming practices, basic software design theory and a brief overview of R, we will delve into programming. We will give you tools to access help and information on R-related challenges and issues, spend some time learning how to install external packages, how to find bugs and address common installation issues. The course will be given by experienced computational biologists from SciLifeLab and Uppsala University. Important dates:  application deadline -- October 20,  acceptance notification — October 25. contact: education@nbis.se 2019-11-11 09:00:00 UTC 2019-11-16 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • Translational Medicine Explained course

    11 - 15 November 2019

    Barcelona, Spain

    Elixir node event
    Translational Medicine Explained course https://tess.elixir-europe.org/events/translational-medicine-explained-course Interested in discovering the landscape of Translational Medicine? Want to learn about the job profiles of scientists in Industry? Then join the 2019 Winter school “Translational Medicine Explained (TMex)” which will be held in the beautiful Palau Macaya in Barcelona from… The post Translational Medicine Explained course appeared first on Dutch Techcentre for Life Sciences. 2019-11-11 09:00:00 UTC 2019-11-15 00:00:00 UTC Barcelona, Spain, Barcelona, Spain Barcelona, Spain Barcelona Spain [] [] [] workshops_and_courses [] []
  • NBIS Course: R programming for Life Scientists

    11 - 16 November 2019

    Uppsala, Sweden

    Elixir node event
    NBIS Course: R programming for Life Scientists https://tess.elixir-europe.org/events/nbis-course-r-programming-for-life-scientists-0f47ae33-6003-48ab-b642-c11efbe7fd19 #training #url: https://www.scilifelab.se/events/r-foundations-for-life-scientists/  #url: https://nbisweden.github.io/workshop-r-1911/ 2019-11-11 - 2019-11-15, Course | Uppsala R programming foundations for Life Science Links: Course: https://nbisweden.github.io/workshop-r-1911/ Registration form: https://squery.typeform.com/to/XMwVk1  The course covers fundamental concepts of programming and software design focusing on programming in R. We will go through various aspects of R scripting emphasizing the parts useful for life scientists. After introductory lectures on good programming practices, basic software design theory and a brief overview of R, we will delve into programming. We will give you tools to access help and information on R-related challenges and issues, spend some time learning how to install external packages, how to find bugs and address common installation issues. The course will be given by experienced computational biologists from SciLifeLab and Uppsala University. Important dates:  application deadline -- October 20,  acceptance notification — October 25. contact: education@nbis.se 2019-11-11 09:00:00 UTC 2019-11-16 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] #trainingtraining
  • Basic statistics in R - Leuven

    18 November - 2 December 2019

    Leuven, Belgium

    Elixir node event
    Basic statistics in R - Leuven https://tess.elixir-europe.org/events/basic-statistics-in-r-leuven Get an idea of what R and Rstudio is Use R to handle data: creating, reading, reformatting and writing data Use R to create graphics Use basic statistical techniques in R : normality tests, t-tests, wilcoxon tests, chi square tests, correlations, survival analysis... Write and use R scripts 2019-11-18 09:00:00 UTC 2019-12-02 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Genome Engineering

    19 November 2019

    Leuven, Belgium

    Elixir node event
    Genome Engineering https://tess.elixir-europe.org/events/genome-engineering 2019-11-19 09:00:00 UTC 2019-11-19 00:00:00 UTC VIB Bioinformatics Core Provinciehuis Vlaams-Brabant, Leuven, Belgium Provinciehuis Vlaams-Brabant Leuven Belgium 3010 [] [] [] [] [] []
  • NBIS Course: De novo Genome Assembly

    20 - 23 November 2019

    Uppsala, Sweden

    Elixir node event
    NBIS Course: De novo Genome Assembly https://tess.elixir-europe.org/events/nbis-course-prel-de-novo-genome-assembly More information will follow, see https://www.scilifelab.se/education/courses%26training for questions: education@nbis.se 2019-11-20 09:00:00 UTC 2019-11-23 00:00:00 UTC Uppsala, Sweden Uppsala Sweden [] jessica.lindvall@scilifelab.se [] [] [] [] []
  • Analysis of 16S rRNA metagenomic experiments

    25 November 2019

    Leuven, Belgium

    Elixir node event
    Analysis of 16S rRNA metagenomic experiments https://tess.elixir-europe.org/events/analysis-of-16s-rrna-metagenomic-experiments Processing and statistical analysis of 16S rRNA metagenomic experiments using R & Lotus pipeline. The following analytical steps from raw data to communicable results will be on the programme: - Preparation of sequencing data, read filtering, data cleaning - Data normalization - Numerical ecology: Clustering, Ordination, Diversity, Modelling - Univariate & Multivariate Statistics - Biological interpretation 2019-11-25 09:00:00 UTC 2019-11-25 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Advances in Computational Biology Conference 2019

    28 - 29 November 2019

    Barcelona, Spain

    Elixir node event
    Advances in Computational Biology Conference 2019 https://tess.elixir-europe.org/events/advances-in-computational-biology-conference-2019 The first **Advances in Computational Biology conference – _Fostering collaboration among women scientists_** will bring together researchers working on systems biology, omics technologies, artificial intelligence and high-performance computing with applications to biology from both the public and private sectors. One of the main purposes of the conference is to **visualize and promote the research done by women scientists** and for this reason, all presenters will be women, although the conference is open to everyone. We want to create a space to foster collaborations between scientists, providing an excellent opportunity to share ideas and build research networks. Topics included: - **Learning from Biological Sequences**: population genomics, evolutionary genomics, systems biology, transcriptomics, sequence analysis - **When Computational Biology meets Medicine**: biomedical applications, mutational landscapes, clinical genomics - **Machines Speeding up Research**: high performance computing, machine learning in the life sciences, imaging data analysis, dynamic simulations and algorithm development Key dates: - Open registration: May 6th, 2019 - Abstract submission opens: May 6th, 2019 - **Abstract submission deadline: July 1st, 2019** - Early bird registration deadline: September 15th, 2019 - Registration deadline: November 1st, 2019 - AdvCompBio Conference: November 28th - 29th, 2019 The programme will include poster and oral presentations, as well as keynotes from leading scientists in the computational biology and high-performance computing fields. The keynote speakers of the conference are: **Christine Orengo**, group leader of Orengo Group at University College London, **Natasa Przulj**, group leader of the Life Sciences – Integrative Computational Network Biology at the Barcelona Supercomputing Center and **Marie-Christine Sawley**, director of the Exascale Lab at Intel. The confirmed chairs of the conference are: **Alison Kennedy**, director of the STFC Hartree Centre, **Janet Kelso**, group leader of the Minerva Research Group for Bioinformatics at the Max Planck Institute for Evolutionary Anthropology, and **Nuria Lopez-Bigas**, leader of the Biomedical Genomics Research Group at the Institute for Research in Biomedicine Barcelona. Furthermore, the participants will have the opportunity to interact personally with female leaders in the fields of IT, academic research and politics that support the conference. The conference is organised by the Bioinfo4Women programme from the Barcelona Supercomputing Center (BSC-CNS) with the collaboration of IMIM-UPF Research Programme on Biomedical Informatics (GRIB), the Spanish National Bioinformatics Institute (INB/ELIXIR-ES) and the Universitat Politècnica de Catalunya (UPC). It is an affiliate conference of the International Society for Computational Biology (ISCB). 2019-11-28 09:00:00 UTC 2019-11-29 17:00:00 UTC La Pedrera, 92, Passeig de Gràcia, Barcelona, Spain La Pedrera, 92, Passeig de Gràcia Barcelona Barcelona Spain Imaging Machine learning Computational biology Computer science Biomedical science Sequence analysis Transcriptomics Evolutionary biology Population genomics Omics Systems biology Bioinformatics [] [] ResearchersPhD studentsPostdoctoral studentsComputer scienceComputational biologistsbioinformaticians meetings_and_conferences [] HPCBioinformaticsComputational BiologyArtificial IntelligenceGenomicsTranscriptomicsSystems biologyPopulation GenomicsEvolutinary genomicsSequence Analysisbiomedical applicationsmutational landscapesclinical genomicsImagingdynamic simulationsalgorithmsmachine learning
  • CABANA Workshop: Analysis of Crop Genomics Data

    2 - 6 December 2019

    Bogota, Colombia

    Elixir node event
    CABANA Workshop: Analysis of Crop Genomics Data https://tess.elixir-europe.org/events/cabana-workshop-analysis-of-crop-genomics-data This course will introduce crop biologists to methods and approaches for analysing crop genomics data. 2019-12-02 08:30:00 UTC 2019-12-06 12:45:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Marco Cristancho [] [] [] [] HDRUK
  • Gentle hands-on introduction to Python programming

    9 - 10 January 2020

    Leuven, Belgium

    Elixir node event
    Gentle hands-on introduction to Python programming https://tess.elixir-europe.org/events/gentle-hands-on-introduction-to-python-programming-6124936d-cd9a-431f-b7de-2736a4c81e66 Learning the basics of Python programming: different variables, reading files, writing files, conditional statements Being able to write a basic Python script from scratch 2020-01-09 09:00:00 UTC 2020-01-10 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Introduction to the analysis of NGS data

    10 February 2020

    Leuven, Belgium

    Elixir node event
    Introduction to the analysis of NGS data https://tess.elixir-europe.org/events/introduction-to-the-analysis-of-ngs-data-29290307-aebd-49d0-89f9-bc31fe089b47 This training is an introduction to a series of trainings on the analysis of Next Generation Sequencing data. This training is intended for newbies to the field and will teach them all background knowledge required to successfully complete the advanced NGS analysis trainings. To this end the training will give an overview of: - The Illumina platform - NGS data formats and file handling - Quality control of NGS data - Assembly and mapping of NGS data - Supporting IT: Galaxy and GenePattern platform 2020-02-10 09:00:00 UTC 2020-02-10 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
  • Applied Bioinformatics in Life Sciences (3rd edition)

    13 - 14 February 2020

    Leuven, Belgium

    Elixir node event
    Applied Bioinformatics in Life Sciences (3rd edition) https://tess.elixir-europe.org/events/applied-bioinformatics-in-life-sciences-3rd-edition Bioinformatics has quickly become an integral part of life sciences research by enabling innovative computational approaches in an increasingly data-dense environment. Inspired by the sold-out editions in 2016 and 2018, VIB (a non-profit life sciences research institute) is organizing this third edition to highlight recent developments in bioinformatics research, and to showcase its impact in medical, agricultural, and biotechnological research. Nationally and internationally renowned speakers will present recent scientific findings in applied bioinformatics. They will shed light on the future perspectives of their research in the following plenary sessions: - Microbial & plant genomics: from simple to complex - Structural bioinformatics and proteomics - Data integration, machine learning and networks - Single cell bioinformatics Besides an inspiring scientific program, conference participants will have ample networking opportunities during poster sessions and the conference dinner. ### Speaker line-up: - Roser Vento, Sanger Institute, UK - Klaus Mayer, Helmholtz Zentrum München, DE - Thijs Ettema, Wageningen University, NL - Rohit Pappu, Washington University, US - Patrick Aloy, Structural Bioinformatics Lab, IRB Barcelona, ES - Helen Parkinson, EMBL-EBI, UK - Nick Loman, University of Birmingham, UK - Daifeng Wang, Stony Brook University, US - Aedin Culhane, Dana-Farber Cancer Institute & Harvard TH Chan School of Public Health, US - Sushmita Roy, Dept. of Biostatistics and Medical Informatics, Wisconsin Institute for Discovery, University of Wisconsin, US - Olga Vitek, Northeastern University, US - Nikolai Slavov, Northeastern University, US - Evangelia Petsalaki, EMBL-EBI, UK - Ashley Lu, VIB-KU Leuven Center for Brain & Disease Research, BE - Sofia Forslund, Experimental and Clinical Research Centre (ECRC, a joint venture of the Max Delbrück Center for Molecular Medicine and the Charité University Hospital), DE - Laurent Gatto, De Duve Institute – UC Louvain, BE - Erik Garrison, UC Santa Cruz, US ### Travel Grants We offer 5 travel grants to international attendees, which will reimburse travel costs up to 400 Euros. Are you interested in attending ABLS20 and want to have a chance on a travel grant? Submit your motivation below by clicking on the 'Apply for a grant' button before 15 November. The organizing committee will notify you of your travel grant acceptance on 22 November 2019. No registration is needed before submitting a travel grant proposal. When you’re awarded with a travel grant you will receive a practical email containing the next steps. Note that being awarded a travel grant does not mean being registered for the conference. Scroll down to apply for your grant. 2020-02-13 08:00:00 UTC 2020-02-14 18:00:00 UTC VIB Provinciehuis Provincie Vlaams-Brabant Provincieplein 1 3010 Leuven Belgium, Leuven, Belgium Provinciehuis Provincie Vlaams-Brabant Provincieplein 1 3010 Leuven Belgium Leuven Belgium 3010 Genomics Bioinformatics Data integration and warehousing Machine learning VIBKU Leuven conferences@vib.be [] [] 250 meetings_and_conferences [] bioinformaticsgenomicsProteomicsData Integrationmachine learning
  • Hands on introduction to ChIP-seq and ATAC-seq analysis

    17 February 2020

    Leuven, Belgium

    Elixir node event
    Hands on introduction to ChIP-seq and ATAC-seq analysis https://tess.elixir-europe.org/events/hands-on-introduction-to-chip-seq-and-atac-seq-analysis The aim is to: have an understanding of the nature of ChIP-seq and ATAC-seq data perform a complete analysis workflow including QC, read mapping, visualization in a genome browser and peak-calling using command line and open source software for each each step  have an overview of possible downstream analyses perform a motif analysis with online web programs This training does not cover all methods available today. It does not aim at bringing users to a professional NGS analyst level but provides enough information to allow biologists understand what DNA sequencing practically is and to communicate with NGS experts for more in-depth needs. 2020-02-17 09:00:00 UTC 2020-02-17 00:00:00 UTC VIB Bioinformatics Core Park Inn by Radisson Leuven, Leuven, Belgium Park Inn by Radisson Leuven Leuven Belgium 3010 [] [] [] [] [] []
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