Register event
  • April 2013 GMOD Meeting

    6 - 7 April 2013

    Cambridge, United Kingdom

    April 2013 GMOD Meeting https://tess.elixir-europe.org/events/april-2013-gmod-meeting 2013-04-06 00:00:00 UTC 2013-04-07 00:00:00 UTC Generic Model Organism Database community Cambridge, United Kingdom Cambridge United Kingdom [] [] [] meetings_and_conferences [] []
  • Bioinformatics: R for molecular epidemiology of viruses

    2 - 4 May 2013

    Cambridge, United Kingdom

    Bioinformatics: R for molecular epidemiology of viruses https://tess.elixir-europe.org/events/bioinformatics-r-for-molecular-epidemiology-of-viruses 2013-05-02 00:00:00 UTC 2013-05-04 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Public health and epidemiology Bioinformatics [] [] [] workshops_and_courses [] []
  • Bioinformatics: Introduction to Phylogenetic Tree-Building

    31 May - 1 June 2013

    Cambridge, United Kingdom

    Bioinformatics: Introduction to Phylogenetic Tree-Building https://tess.elixir-europe.org/events/bioinformatics-introduction-to-phylogenetic-tree-building 2013-05-31 00:00:00 UTC 2013-06-01 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] []
  • Bioinformatics: Advanced R Programming

    20 June 2013

    Cambridge, United Kingdom

    Bioinformatics: Advanced R Programming https://tess.elixir-europe.org/events/bioinformatics-advanced-r-programming 2013-06-20 00:00:00 UTC 2013-06-20 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] []
  • Genomics in Medicine

    21 June 2013

    Cambridge, United Kingdom

    Genomics in Medicine https://tess.elixir-europe.org/events/genomics-in-medicine-4e33f556-4d63-4fe8-b5bf-2e62b41def47 2013-06-21 00:00:00 UTC 2013-06-21 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom [] [] [] workshops_and_courses [] []
  • Using the Ensembl Genome Browser

    22 June 2013

    Cambridge, United Kingdom

    Using the Ensembl Genome Browser https://tess.elixir-europe.org/events/using-the-ensembl-genome-browser 2013-06-22 00:00:00 UTC 2013-06-22 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] []
  • Bioinformatics: Analysing mapped NGS data with SeqMonk

    6 July 2013

    Cambridge, United Kingdom

    Bioinformatics: Analysing mapped NGS data with SeqMonk https://tess.elixir-europe.org/events/bioinformatics-analysing-mapped-ngs-data-with-seqmonk 2013-07-06 00:00:00 UTC 2013-07-06 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] []
  • Bioinformatics: A Practical User Introduction

    23 - 25 July 2013

    Cambridge, United Kingdom

    Bioinformatics: A Practical User Introduction https://tess.elixir-europe.org/events/bioinformatics-a-practical-user-introduction 2013-07-23 00:00:00 UTC 2013-07-25 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] []
  • Microarray Analysis with Bioconductor

    29 - 31 August 2013

    Cambridge, United Kingdom

    Microarray Analysis with Bioconductor https://tess.elixir-europe.org/events/microarray-analysis-with-bioconductor 2013-08-29 00:00:00 UTC 2013-08-31 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] []
  • Genome Annotation with Artemis

    27 September 2013

    Cambridge, United Kingdom

    Genome Annotation with Artemis https://tess.elixir-europe.org/events/genome-annotation-with-artemis 2013-09-27 00:00:00 UTC 2013-09-27 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Genomics Bioinformatics [] [] [] workshops_and_courses [] []
  • Multiple Sequence Alignment and Phylogenetics

    19 - 20 December 2013

    Cambridge, United Kingdom

    Multiple Sequence Alignment and Phylogenetics https://tess.elixir-europe.org/events/multiple-sequence-alignment-and-phylogenetics 2013-12-19 00:00:00 UTC 2013-12-20 00:00:00 UTC University of Cambridge Cambridge, United Kingdom Cambridge United Kingdom Bioinformatics [] [] [] workshops_and_courses [] []
  • An Introduction to Solving Biological Problems with R

    16 - 17 February 2015

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with R https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-r-a5bf1162-48ee-4baa-8664-c91ae02d3f46 This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available [here](http://ruddles.bio.cam.ac.uk/~dpjudge/Descriptions/R_Intro.php). The Course Web Site providing links to the course materials is [here](http://logic.sysbiol.cam.ac.uk/teaching/Rcourse/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20R_gsls-rintro_2015.02.16-17_1346838&CourseName=Bioinformatics:%20An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20R&CourseDate=2015.02.16-17&CourseDuration=2&EventID=1346838).'' 2015-02-16 09:30:00 UTC 2015-02-17 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of Cambridge and InstitutionsGraduate studentsPostdocs and Staff members from all other external InstitutionsIndividual Course fees are required only from external participants not from Institutions workshops_and_courses [] HDRUK
  • An Introduction to Solving Biological Problems with Python

    19 - 20 February 2015

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with Python https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-python-2aea7672-3cdb-4034-b8b7-e4bffdc362f6 This course provides a practical introduction to the writing of Python programs for the complete novice. Participants are lead through the core aspects of Python illustrated by a series of example programs. Upon completion of the course, attentive participants will be able to write simple Python programs from scratch and to customize more complex code to fit their needs. Further information is available [here](http://ruddles.bio.cam.ac.uk/~dpjudge/Descriptions/Python.php). The Course Web Site providing links to the course materials is [here](http://pycam.github.io). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20Python_gsls-python_2015.02.19-20_1346873&CourseName=Bioinformatics:%20An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20Python&CourseDate=2015.02.19-20&CourseDuration=2&EventID=1346873).'' 2015-02-19 09:30:00 UTC 2015-02-20 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Whole Exome Sequencing and RNA-sequence data analysis

    23 - 25 February 2015

    Cambridge, United Kingdom

    Elixir node event
    Whole Exome Sequencing and RNA-sequence data analysis https://tess.elixir-europe.org/events/whole-exome-sequencing-and-rna-sequence-data-analysis This course covers state-of-the-art tools and methods for NGS RNA-seq and exome variant data analysis, which are of major relevance in today's genomic and gene expression studies. It is oriented to experimental researchers, post-doctoral and PhD students who want to learn about the state-of-the-art of genomic variant and transcriptomics data analysis methodologies and carry out their own analysis. Further information is available [here](http://ruddles.bio.cam.ac.uk/~dpjudge/Descriptions/Ximo.php). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20Whole%20Exome%20Sequencing%20and%20RNA-sequence%20data%20analysis_gsls-ximo_2015.02.23-25_1362148&CourseName=Bioinformatics:%20Whole%20Exome%20Sequencing%20and%20RNA-sequence%20data%20analysis&CourseDate=2015.02.23-25&CourseDuration=3&EventID=1362148).'' 2015-02-23 09:30:00 UTC 2015-02-25 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Introduction to Galaxy: Data Manipulation and Visualisation

    27 February 2015

    Cambridge, United Kingdom

    Elixir node event
    Introduction to Galaxy: Data Manipulation and Visualisation https://tess.elixir-europe.org/events/introduction-to-galaxy-data-manipulation-and-visualisation-f2a53617-25ca-470f-ae1a-b77d033503cc Galaxy (http://galaxyproject.org/) is an open, web-based platform for data intensive life science research that enables non-bioinformaticians to create, run, tune, and share their own bioinformatic analyses. This introductory course will cover Galaxy's basic functionality, simple data manipulation and visualization. This event is mostly targeted at first time users. Further information is available [from the course website](http://galaxycam.github.io/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20Introduction%20to%20Galaxy%20-%20Data%20Manipulation%20and%20Visualisation_gsls-galaxy01_1362281_2015-02-27&CourseName=Bioinformatics:%20Introduction%20to%20Galaxy%20-%20Data%20Manipulation%20and%20Visualisation&CourseDate=2015-02-27&CourseDuration=1&EventID=1362281).'' 2015-02-27 09:30:00 UTC 2015-02-27 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • An Introduction to Solving Biological Problems with R

    11 - 12 March 2015

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with R https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-r-9cc6a2e6-7037-435e-ab48-bb43663b3608 This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available [here](http://ruddles.bio.cam.ac.uk/~dpjudge/Descriptions/R_Intro.php). The Course Web Site providing links to the course materials is [here](http://logic.sysbiol.cam.ac.uk/teaching/Rcourse/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20R_gsls-rintro_2015.03.11-12_1346856&CourseName=Bioinformatics:%20An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20R&CourseDate=2015.03.11-12&CourseDuration=2&EventID=1346856).'' 2015-03-11 09:30:00 UTC 2015-03-12 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Analysis of mapped NGS data with SeqMonk

    13 March 2015

    Cambridge, United Kingdom

    Elixir node event
    Analysis of mapped NGS data with SeqMonk https://tess.elixir-europe.org/events/analysis-of-mapped-ngs-data-with-seqmonk SeqMonk is a graphical program for the visualisation and analysis of large mapped datasets such as ChIP-Seq, RNA-Seq, and BS-Seq. Further information is available [here](http://ruddles.bio.cam.ac.uk/~dpjudge/Descriptions/SeqMonk.php). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20Analysing%20mapped%20NGS%20data%20with%20SeqMonk_gsls-seqmonk_2015.03.13_1349493&CourseName=Bioinformatics:%20Analysing%20mapped%20NGS%20data%20with%20SeqMonk&CourseDate=2015.03.13&CourseDuration=1&EventID=1349493).'' 2015-03-13 09:30:00 UTC 2015-03-13 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • EMBL-EBI: Network Analysis - Cytoscape and PSICQUIC

    16 March 2015

    Cambridge, United Kingdom

    Elixir node event
    EMBL-EBI: Network Analysis - Cytoscape and PSICQUIC https://tess.elixir-europe.org/events/embl-ebi-network-analysis-cytoscape-and-psicquic This session provides an introduction to Network Analysis using Cytoscape and PSICQUIC [from the European Bioinformatics Institute (EBI)]. It is aimed at biologists and computer scientists wanting to learn the basics of network analysis. Further information for this session is available [here](http://ruddles.bio.cam.ac.uk/~dpjudge/Descriptions/Pablo.php). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20Network%20Analysis%20-%20Cytoscape%20and%20PSICQUIC_gsls-ebinetworks_2015-03-16_1349118&CourseName=Bioinformatics:%20Network%20Analysis%20-%20Cytoscape%20and%20PSICQUIC&CourseDate=2015-03-16&CourseDuration=1&EventID=1349118).'' 2015-03-16 09:30:00 UTC 2015-03-16 17:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Next Generation Sequencing data analysis

    17 - 20 March 2015

    Cambridge, United Kingdom

    Elixir node event
    Next Generation Sequencing data analysis https://tess.elixir-europe.org/events/next-generation-sequencing-data-analysis-f3c2de3a-4f16-442a-9210-3e916e2b10bc This course provides an introduction to next generation sequencing (NGS) data analysis methodologies. Lectures will give insight into how biological knowledge can be generated from RNA-seq, ChIP-seq and DNA-seq experiments and illustrate different ways of analyzing such data. Practicals will consist of computer exercises that will enable the participants to apply statistical methods to the analysis of RNA-seq, ChIP-seq and DNA-seq data under the guidance of the lecturers and teaching assistants. It is aimed at researchers who are applying or planning to apply NGS technologies and bioinformatics methods in their research. The timetable for this event can be found [here](https://drive.google.com/file/d/0B5BzNXp93Gp5eVNWU1FuTGJxbWs/view?usp=sharing). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20Next%20Generation%20Sequencing%20data%20analysis_gsls-ngs_2015.03.17-20_1353918&CourseName=Bioinformatics:%20Next%20Generation%20Sequencing%20data%20analysis&CourseDate=2015.03.17-20&CourseDuration=4&EventID=1353918).'' 2015-03-17 09:00:00 UTC 2015-03-20 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Using the Ensembl Genome Browser

    23 March 2015

    Cambridge, United Kingdom

    Elixir node event
    Using the Ensembl Genome Browser https://tess.elixir-europe.org/events/using-the-ensembl-genome-browser-085dbd75-fa9c-4bf7-ab8d-b6257a1147ee [The Ensembl project](http://www.ensembl.org) provides a comprehensive and integrated source of annotation of, mainly vertebrate, genome sequences. This one-day workshop offers a comprehensive practical introduction to the use of the Ensembl genome browser as well as essential background information. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20Using%20the%20Ensembl%20Genome%20Browser_gsls-ensbrow_2015.03.23_1351263&CourseName=Bioinformatics:%20Using%20the%20Ensembl%20Genome%20Browser&CourseDate=2015.03.23&CourseDuration=1&EventID=1351263).'' 2015-03-23 09:30:00 UTC 2015-03-23 17:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • An Introduction to MATLAB for biologists

    24 - 25 March 2015

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to MATLAB for biologists https://tess.elixir-europe.org/events/an-introduction-to-matlab-for-biologists-150f2af2-70da-41eb-91bb-c635c024107d A two-day course designed to introduce MATLAB and some basic programming concepts. Further information is available [here](http://ruddles.bio.cam.ac.uk/~dpjudge/Descriptions/MATLAB.php). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20An%20Introduction%20to%20MATLAB_gsls-MATLAB_2015.03.24-25_1346918&CourseName=Bioinformatics:%20An%20Introduction%20to%20MATLAB&CourseDate=2015.03.24-25&CourseDuration=2&EventID=1346918).'' 2015-03-24 09:30:00 UTC 2015-03-25 17:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • R object-oriented programming and package development

    31 March 2015

    Cambridge, United Kingdom

    Elixir node event
    R object-oriented programming and package development https://tess.elixir-europe.org/events/r-object-oriented-programming-and-package-development-18108040-7a06-4fb1-848c-6e6277bd1d0e The course will present intermediate to advanced R programming using the object-oriented programming paradigm. It will cover how to document code and data to produce a fully functional R package. Further information is available [here](http://ruddles.bio.cam.ac.uk/~dpjudge/Descriptions/R_Advanced.php). The Course Web Site providing links to the course materials is [here](http://logic.sysbiol.cam.ac.uk/teaching/advancedR). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20R%20object-oriented%20programming%20and%20package%20development_gsls-radv_1346911_2015-03-31&CourseName=Bioinformatics:%20R%20object-oriented%20programming%20and%20package%20development&CourseDate=2015-03-31&CourseDuration=1&EventID=1346911).'' 2015-03-31 08:30:00 UTC 2015-03-31 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • An Introduction to Solving Biological Problems with R

    1 - 2 April 2015

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with R https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-r-fb93328d-9843-43f9-8a17-91527a4c64fb This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available [here](http://ruddles.bio.cam.ac.uk/~dpjudge/Descriptions/R_Intro.php). The Course Web Site providing links to the course materials is [here](http://logic.sysbiol.cam.ac.uk/teaching/Rcourse/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20R_gsls-rintro_2015.04.01-02_1416288&CourseName=Bioinformatics:%20An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20R&CourseDate=2015.04.01-02&CourseDuration=2&EventID=1416288).'' 2015-04-01 08:30:00 UTC 2015-04-02 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Introduction to genome variation analysis using NGS

    9 - 10 April 2015

    Cambridge, United Kingdom

    Elixir node event
    Introduction to genome variation analysis using NGS https://tess.elixir-europe.org/events/introduction-to-genome-variation-analysis-using-ngs-3cec9083-9e10-467d-b5bd-1631f758fa47 This course provides an introduction to the analysis of genome sequence variation with next generation sequencing data (NGS), including: *an introduction to genetic variation as well as data formats and analysis workflows commonly used in NGS data analysis; *an overview of available analytical tools and discussion of their limitations; and *hands-on experience with common computational workflows for analysing genome sequence variation using bioinformatics and computational genomics approaches. A draft agenda can be found [here](https://drive.google.com/file/d/0B5BzNXp93Gp5QWc1UlRDZEc1cXM/view?usp=sharing) Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Introduction%20to%20genome%20variation%20analysis%20using%20NGS_bioinfo-var_2015.04.9-10_1409340&CourseName=Introduction%20to%20genome%20variation%20analysis%20using%20NGS&CourseDate=2015.04.9-10&CourseDuration=2&EventID=1409340).'' 2015-04-09 08:30:00 UTC 2015-04-10 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • An Introduction to Solving Biological Problems with PERL

    14 - 15 April 2015

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with PERL https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-perl-0fc54a8b-c0da-46e0-9d1b-9e9a7f0219f5 This course is aimed at those new to programming and provides an introduction to programming using Perl. During this course you will learn the basics of the Perl programming language, including how to store data in Perl’s standard data structures such as arrays and hashes, and how to process data using loops, functions, and many of Perl’s built in operators. You will learn how to write and run your own Perl scripts and how to pass options and files to them. The course also covers sorting, regular expressions, references and multi-dimensional data structures. The course will be taught using the online [Learning Perl](http://sofiarobb.com/learning-perl-toc/) materials created by [Sofia Robb](http://stajich.bioinformatics.ucr.edu/members/sofia-robb) of the [University of California Riverside](http://www.ucr.edu/). The course website providing links to the course materials is [here](http://bit.ly/cambridgeperl). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20Bioinformatics:%20An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20PERL_gsls-perlintro_2015.04.14-15_1346940&CourseName=Bioinformatics:%20Bioinformatics:%20An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20PERL&CourseDate=2015.04.14-15&CourseDuration=2&EventID=1346940).'' 2015-04-14 08:30:00 UTC 2015-04-15 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Protein Structure Modelling

    16 - 17 April 2015

    Cambridge, United Kingdom

    Elixir node event
    Protein Structure Modelling https://tess.elixir-europe.org/events/protein-structure-modelling This practical-based course will deal with all aspects of the prediction of protein structure, concentrating on the prediction of secondary structure, fold recognition and comparative modelling of structures. Computational aspects of protein structure determination, validation and analysis will be covered. The course will be a mixture of talks and guided practicals. Further information is available [here](http://ubio.bioinfo.cnio.es/Cursos/Cambridge2015/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20Protein%20Structure%20Modelling_gsls-prostruct_2015-04-16-17_1346893&CourseName=Bioinformatics:%20Protein%20Structure%20Modelling&CourseDate=2015-04-16-17&CourseDuration=2&EventID=1346893).'' 2015-04-16 08:30:00 UTC 2015-04-17 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Image Analysis for Biologists

    20 - 22 April 2015

    Cambridge, United Kingdom

    Elixir node event
    Image Analysis for Biologists https://tess.elixir-europe.org/events/image-analysis-for-biologists-9d8300d6-cd80-4ccd-a945-6f71b19a624d *This course will focus on computational methods for analyzing cellular images and extracting quantitative data from them. *It is aimed at researchers who are applying or planning to apply image analysis in their research *On day 1 we will introduce principles of image processing and analysis, giving an overview of commonly used algorithms through a series of talks and practicals based around [Fiji](http://fiji.sc/Fiji), an extensible open source software package. *On day 2 we will then use Matlab as an environment for bioimage informatics, covering image segmentation and quantitation, interactive data visualization, basic statistical analysis and machine learning algorithms. [OME](https://www.openmicroscopy.org/site) software and data format standards for the storage and manipulation of biological microscopy data will also be presented. *On day 3 we will focus on how to use [CellProfiler](http://www.cellprofiler.org/), an open-source, freely-downloadable software package designed for large-scale, automated phenotypic image analysis. *A draft agenda can be found [here](https://drive.google.com/file/d/0B5BzNXp93Gp5czFIZnRUNGlIaVk/view?usp=sharing). *This event is sponsored by the [Systems Microscopy NoE](http://www.systemsmicroscopy.eu/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20Image%20Analysis%20for%20Biologists%20_2015.04.20-22_1372458&CourseName=Bioinformatics:%20Image%20Analysis%20for%20Biologists&CourseDate=2015.04.20-22&CourseDuration=3&EventID=1372458).'' 2015-04-20 08:30:00 UTC 2015-04-22 15:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Variant Analysis with GATK

    23 - 24 April 2015

    Cambridge, United Kingdom

    Elixir node event
    Variant Analysis with GATK https://tess.elixir-europe.org/events/variant-analysis-with-gatk-2aa6f7c8-24d5-4427-bb1c-cfb82494bb71 *This workshop will focus on the core steps involved in calling variants with the Broad’s [Genome Analysis Toolkit](https://www.broadinstitute.org/gatk/), using the “Best Practices” developed by the GATK team. *You will learn why each step is essential to the variant calling process, what are the key operations performed on the data at each step, and how to use the GATK tools to get the most accurate and reliable results out of your dataset. Special attention will be given to the newest functionalities in GATK3, including joint discovery in cohorts and RNAseq analysis. *The workshop will last two days, with a day and a half of lectures (including many opportunities for Q&A) and one half day of hands-on training. *On the first day, we will explain the rationale, theory and real-life applications of our Best Practices for Variant Discovery in high-throughput sequencing data. *On the second day, in the morning we will cover additional topics such as the differences between whole genome vs. exome analysis, sequence data QC metrics, and how to apply GATK to non-model organisms. In the afternoon, we will hold a hands-on session in which attendees will learn to interact with the GATK tools and apply them effectively. *The lecture-based component of the workshop is aimed at a mixed audience of people who are new to GATK seeking an introductory course into the tools, or who are already GATK users seeking to improve their understanding of and proficiency with the tools. The hands-on component is aimed mainly at beginners who have basic familiarity with the command line environment. *A draft agenda can be found [here](https://drive.google.com/file/d/0B5BzNXp93Gp5eWtiaWtFdnJRcEU/view?usp=sharing). * This event is sponsored by [eLife](http://elifesciences.org/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20Variant%20Analysis%20with%20GATK%20_2015.04.23-24_1380452&CourseName=Bioinformatics:%20Variant%20Analysis%20with%20GATK&CourseDate=2015.04.23-24&CourseDuration=2&EventID=1380452).'' 2015-04-23 08:30:00 UTC 2015-04-24 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • An Introduction to Solving Biological Problems with R

    28 - 29 April 2015

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with R https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-r-54d99792-0190-4e56-8197-2b73bf03feeb This course provides an introduction to the R programming language and software environment for statistical computing and graphics. A variety of examples with a biological theme will be presented. Further information is available [here](http://ruddles.bio.cam.ac.uk/~dpjudge/Descriptions/R_Intro.php). The Course Web Site providing links to the course materials is [here](http://logic.sysbiol.cam.ac.uk/teaching/Rcourse/). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20R_gsls-rintro_2015.04.28-29_1433298&CourseName=Bioinformatics:%20An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20R&CourseDate=2015.04.28-29&CourseDuration=2&EventID=1433298).'' 2015-04-28 08:30:00 UTC 2015-04-29 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • An Introduction to Solving Biological Problems with Python

    30 April - 1 May 2015

    Cambridge, United Kingdom

    Elixir node event
    An Introduction to Solving Biological Problems with Python https://tess.elixir-europe.org/events/an-introduction-to-solving-biological-problems-with-python-05d0112b-a06c-4607-abed-8946b5615428 This course provides a practical introduction to the writing of Python programs for the complete novice. Participants are lead through the core aspects of Python illustrated by a series of example programs. Upon completion of the course, attentive participants will be able to write simple Python programs from scratch and to customize more complex code to fit their needs. Further information is available [here](http://ruddles.bio.cam.ac.uk/~dpjudge/Descriptions/Python.php). The Course Web Site providing links to the course materials is [here](http://pycam.github.io). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Bioinformatics:%20An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20Python_gsls-python_2015.04.30-05.01_1429661&CourseName=Bioinformatics:%20An%20Introduction%20to%20Solving%20Biological%20Problems%20with%20Python&CourseDate=2015.04.30-05.01&CourseDuration=2&EventID=1429661).'' 2015-04-30 08:30:00 UTC 2015-05-01 16:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
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