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Organizer: University of Cambridge 

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Keywords: Genomics 

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City: Bogota  or Cambridge 

  • ChIP-seq and ATAC-seq analysis

    2 - 3 May 2019

    Cambridge, United Kingdom

    Elixir node event
    ChIP-seq and ATAC-seq analysis https://tess.elixir-europe.org/events/chip-seq-and-atac-seq-analysis-cee4dfb5-310c-4c50-b8cd-78d29ad162ed The primary aim of this course is to familiarise participants with the analysis of ChIP-seq and ATAC-seq data and provide hands-on training on the latest analytical approaches. The course starts with an introduction to ChIP-seq experiments for the detection of genome-wide DNA binding sites of transcription factors and other proteins. We first show data quality control and basic analytical steps such as alignment, peak calling and motif analysis, followed by practical examples on how to work with biological replicates and fundamental quality metrics for ChIP-seq datasets. On the second day, we then focus on the analysis of differential binding, comparing between different samples. We will also give an introduction to ATAC-seq data analysis for the detection of regions of open chromatin. 2019-05-02 09:00:00 UTC 2019-05-03 17:00:00 UTC University of Cambridge University of Cambridge, Trinity Ln, Cambridge, United Kingdom University of Cambridge, Trinity Ln Cambridge Cambridgeshire United Kingdom [] sermarcue@gmail.com [] Researchers workshops_and_courses [] ChIP-SeqATAC-seqGenomics

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