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54 events found

City: Bogota  or Brussels  or Nijmegen  or Liverpool 

  • Viruses of microbes 2016

    18 - 22 July 2016

    Liverpool, United Kingdom

    Viruses of microbes 2016 https://tess.elixir-europe.org/events/viruses-of-microbes-2016 2016-07-18 01:00:00 UTC 2016-07-22 01:00:00 UTC EMBO Liverpool, United Kingdom Liverpool United Kingdom Proteomics [] [] [] meetings_and_conferences [] []
  • NGS 2016 Benelux: Workshop & Conference

    16 - 17 November 2016

    Brussels, Belgium

    NGS 2016 Benelux: Workshop & Conference https://tess.elixir-europe.org/events/ngs-2016-benelux-workshop-conference 2016-11-16 00:00:00 UTC 2016-11-17 00:00:00 UTC Brussels, Belgium Brussels Belgium Genomics Bioinformatics [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • ELIXIR-EXCELERATE mid-term review meeting

    10 May 2017

    Brussels, Belgium

    ELIXIR-EXCELERATE mid-term review meeting https://tess.elixir-europe.org/events/elixir-excelerate-mid-term-review-meeting The ELIXIR-EXCELERATE mid-term review will take place 10 May 2017. Attendance is by invitation only and full details and agenda will be sent to EXCELERATE partners in due course. Any enquiries about the ELIXIR-EXCELERATE mid-term review meeting should be sent to juan.arenas@elixir-europe.org. 2017-05-10 09:00:00 UTC 2017-05-10 00:00:00 UTC Thon Hotel EU, Brussels, Belgium Thon Hotel EU Brussels Belgium [] [] [] meetings_and_conferences [] []
  • ELIXIR-EXCELERATE mid-term review meeting

    10 May 2017

    Brussels, Belgium

    ELIXIR-EXCELERATE mid-term review meeting https://tess.elixir-europe.org/events/elixir-excelerate-mid-term-review-meeting-aebe482a-1ba3-4430-bbdc-7d9fbb3f5223 The ELIXIR-EXCELERATE mid-term review will take place 10 May 2017. Attendance is by invitation only and full details and agenda will be sent to EXCELERATE partners in due course. Any enquiries about the ELIXIR-EXCELERATE mid-term review meeting should be sent to juan.arenas@elixir-europe.org. 2017-05-10 09:00:00 UTC 2017-05-10 00:00:00 UTC Thon Hotel EU, Brussels, Belgium Thon Hotel EU Brussels Belgium [] [] [] meetings_and_conferences [] []
  • ELIXIR Europe conference: Core Resources for a Data Economy

    11 May 2017

    Brussels, Belgium

    ELIXIR Europe conference: Core Resources for a Data Economy https://tess.elixir-europe.org/events/elixir-europe-conference-core-resources-for-a-data-economy ELIXIR Core Data Resources are a set of data resources that are of fundamental importance to the broad life science community and the long-term preservation of biological data. Their impact is becoming increasingly apparent as greater volumes of complex data are being generated from national and EC-funded research projects. One of the core missions of ELIXIR is to provide stable and sustainable access to these resources.  The high-level conference will address several aspects of these topics, from the perspective of funders, infrastructure operators and users across industry and academia. The event will include an outline of the process that has been established to define the first set of ELIXIR Core Data Resources and panel discussions on the subjects of impact and sustainability. Representatives of the European Commission will give keynote talks on 'Building the European Data Economy' and 'Research Infrastructures for Open Science'.  Full programme in pdf Register here 2017-05-11 09:30:00 UTC 2017-05-11 17:00:00 UTC THON HOTEL EU, Brussels, Belgium THON HOTEL EU Brussels Belgium [] [] [] meetings_and_conferences [] []
  • International Chemical Discovery & Design Course

    12 - 23 June 2017

    Nijmegen, Netherlands

    Elixir node event
    International Chemical Discovery & Design Course https://tess.elixir-europe.org/events/international-chemical-discovery-design-course-9bc0bd09-c4da-4d7e-b065-694957f02523 The 13th annual International Chemical Discovery & Design Course will be held from 12-23 June 2017 at the Radboud University Nijmegen. This course covers the recent advances in discovery informatics, with a focus on the application to real life problems. The… The post International Chemical Discovery & Design Course appeared first on Dutch Techcentre for Life Sciences. 2017-06-12 09:00:00 UTC 2017-06-23 00:00:00 UTC Nijmegen, Netherlands, Nijmegen, Netherlands Nijmegen, Netherlands Nijmegen Netherlands [] [] [] workshops_and_courses [] []
  • CORBEL Practice and Mid term review

    21 - 22 June 2017

    Brussels, Belgium

    CORBEL Practice and Mid term review https://tess.elixir-europe.org/events/corbel-practice-and-mid-term-review The CORBEL project practice and mid-term review will take place 21-22 June 2017. Attendance is by invitation only and full details and agenda will be sent to CORBEL partners in due course. Any enquiries about the CORBEL mid-term review meeting should be sent to friederike.schmidt-tremmel@elixir-europe.org. 2017-06-21 09:00:00 UTC 2017-06-22 00:00:00 UTC Thon Hotel EU, Brussels, Belgium Thon Hotel EU Brussels Belgium [] [] [] meetings_and_conferences [] []
  • Applied Microbial Genomics

    2 - 10 November 2017

    Nijmegen, Netherlands

    Elixir node event
    Applied Microbial Genomics https://tess.elixir-europe.org/events/applied-microbial-genomics Biotechnology research generates large-scale data, and specifically genomics data. But can this data and/or information effectively be used to answer your industrial microbiological research question? This course will teach you to consider and work with data-analysis strategies, which will provide… The post Applied Microbial Genomics appeared first on Dutch Techcentre for Life Sciences. 2017-11-02 09:00:00 UTC 2017-11-10 00:00:00 UTC Nijmegen, Netherlands, Nijmegen, Netherlands Nijmegen, Netherlands Nijmegen Netherlands [] [] [] workshops_and_courses [] []
  • Fundamental data skills needed to conduct data-driven research

    6 - 7 November 2017

    Brussels, Belgium

    Elixir node event
    Fundamental data skills needed to conduct data-driven research https://tess.elixir-europe.org/events/fundamental-data-skills-needed-to-conduct-data-driven-research Swift Introduction to Data Handling using Linux, R and Python Two-day workshop (6-7 November 2017) on the fundamental data skills needed to conduct data-driven research. Further details to follow. Read more The post Fundamental data skills needed to conduct data-driven research appeared first on Dutch Techcentre for Life Sciences. 2017-11-06 09:00:00 UTC 2017-11-07 00:00:00 UTC Brussels, Belgium, Brussels, Belgium Brussels, Belgium Brussels Belgium [] [] [] workshops_and_courses [] []
  • Ensembl Browser Workshop, Bogota, 11 February 2018

    11 February 2018

    Bogota, Colombia

    Elixir node event
    Ensembl Browser Workshop, Bogota, 11 February 2018 https://tess.elixir-europe.org/events/ensembl-browser-workshop-bogota-11-february-2018 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2018-02-11 09:00:00 UTC 2018-02-11 17:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] []
  • Multiple Sequence Alignment with Jalview and Protein Structure and Function Modelling

    14 - 15 May 2018

    Liverpool, United Kingdom

    Elixir node event
    Multiple Sequence Alignment with Jalview and Protein Structure and Function Modelling https://tess.elixir-europe.org/events/multiple-sequence-alignment-with-jalview-and-protein-structure-and-function Date: Monday 14th to Tuesday 15th May 2018 Time: 9.00 to 17.00 Location: MSTC, Sherrington Building, University of Liverpool, L69 3BX Overview This two day hands-on training course is aimed at students and researchers who want to gain practical understanding of the tools and approaches for protein sequence, structure and function prediction and analysis. In day 1, participants will be introduced to Jalview - a free desktop application for the visualisation and comparative analysis of protein, DNA and RNA sequences. Jalview can integrate data from Ensembl, Uniprot, PDBe, Rfam and Pfam, and can access a range of tools for multiple sequence alignment, conservation analysis and secondary structure and disorder prediction, including the widely used JPred4. On the second day, participants will learn to use Jalview’s 3D structure visualisation capabilities in conjunction with UCSF Chimera, and take a whistle-stop tour of the methodologies and tools for prediction and analysis of Protein 3D structure and function. Participants are encouraged to bring their own protein analysis problems and time will be reserved at the end of day 2 for discussion. Register using the link on the Jalview website: http://www.jalview.org/training/training-courses/Multiple-Sequence-Alignment-with-Jalview-and-Protein-Structure-and Day 1: Multiple Sequence Alignment and Analysis with Jalview Workshop trainers: Dr Jim Procter and Dr Suzanne Duce 9 9.15 Introduction to the Workshop 9.15 10.30 Session 1.Loading sequences, structures and alignments with Jalview Coffee break 11 12.30 Session 2. Multiple alignment Creation and Alignment Reliability Lunch 1.30 3pm Session 3. Phylogenetic trees and subfamily analysis of Proteins and CDS Coffee break 3.30 5pm Session 4. Protein secondary structure and disorder prediction, and working with annotation Day 2: Protein Structure Analysis and Modelling Workshop trainers: Dr Jim Procter and Dr Dan Rigden 9 9.15 Introduction to Workshop Day 2 9.15 9.30 Introduction to Protein 3D Structure 9.30 10 Viewing and Comparing 3D structures with Jalview and UCSF Chimera 10 10.30 Mapping sequence conservation to Biological Assemblies with Jalview Coffee Break 11 12.30 Functional analysis of Protein Structures Lunch 1.30 2.30 Homology modelling and model quality evaluation 2.30 3.15 Ab initio models and searching for fold matches 3.15 3.30 Wrap up: Function Analysis and 3D models Coffee Break 4pm 5pm Analyse your own protein sequences and structures. 2018-05-14 09:00:00 UTC 2018-05-15 17:00:00 UTC Dr Jim Procter and Dr Dan Rigden MSTC, Sherrington Building, University of Liverpool, Liverpool, United Kingdom MSTC, Sherrington Building, University of Liverpool Liverpool Merseyside United Kingdom L69 3BX University of Liverpool Dr Jim Procter and Dr Suzanne Duce, School of Life Sciences, University of Dundee, Dundee University of Dundee PhD studentspostdoctoral researchersprinciple investigatorsLife Science Researchersbioinformaticians 45 workshops_and_courses registration_of_interest Jalviewmultiple sequence alignmentMSAprotein sequence protein structure protein predictionHomology modellingAb initio modelsChimerasubfamily analysisPhylogenetic treesProtein secondary structureUniversity of DundeeUniversity of Liverpool
  • Data Carpentry Workshop

    12 - 13 June 2018

    Brussels, Belgium

    Elixir node event
    Data Carpentry Workshop https://tess.elixir-europe.org/events/data-carpentry-workshop-ad14a7bf-c734-44dc-a8d1-a53b4a64e420 The ever-increasing digital nature of research requires researchers, postgraduate students, and research-support staff to equip themselves with the skills to create, manipulate and manage data in digital format. Today, researchers can perform simple to complex data management through open source… The post Data Carpentry Workshop appeared first on Dutch Techcentre for Life Sciences. 2018-06-12 09:00:00 UTC 2018-06-13 00:00:00 UTC Brussels, Belgium, Brussels, Belgium Brussels, Belgium Brussels Belgium [] [] [] workshops_and_courses [] []
  • Data Carpentry June 2018

    12 - 13 June 2018

    Brussels, Belgium

    Elixir node event
    Data Carpentry June 2018 https://tess.elixir-europe.org/events/data-carpentry-june-2018 2018-06-12 09:30:00 UTC 2018-06-13 17:00:00 UTC ELIXIR Belgium Brussels, Belgium Brussels Belgium 1050 [] [] [] [] [] []
  • VIB Community Meeting - Bioinformatics and Computational Biology

    6 September 2018

    Brussels, Belgium

    Elixir node event
    VIB Community Meeting - Bioinformatics and Computational Biology https://tess.elixir-europe.org/events/vib-community-meeting-bioinformatics-and-computational-biology b'\r\n\r\n\n \r\n\r\n\n \r\n\n' 2018-09-06 09:30:00 UTC 2018-09-06 16:00:00 UTC VIB Bioinformatics Core U-Residence, Brussels, Belgium U-Residence Brussels Belgium 1050 [] [] [] [] [] []
  • CABANA Train the Trainer Workshop

    15 - 16 November 2018

    Bogota, Colombia

    Elixir node event
    CABANA Train the Trainer Workshop https://tess.elixir-europe.org/events/cabana-train-the-trainer-workshop This course will provide new trainers with knowledge, skills, guidance and tips for developing and delivering training. 2018-11-15 09:30:00 UTC 2018-11-16 17:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Alejandro Reyes [] [] [] [] HDRUK
  • Untapping diversity through Metagenomics: An Introductory Workshop

    3 - 6 December 2018

    Bogota, Colombia

    Elixir node event
    Untapping diversity through Metagenomics: An Introductory Workshop https://tess.elixir-europe.org/events/untapping-diversity-through-metagenomics-an-introductory-workshop In this course participants will learn the basics of metagenomics, covering experimental design and workflows, moving through to microbiome analysis via amplicon sequencing and shotgun metagenomics. 2018-12-03 08:30:00 UTC 2018-12-06 17:30:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Alejandro Reyes [] [] [] [] []
  • CABANA Workshop: Untapping diversity through Metagenomics: An Introductory Workshop

    3 - 6 December 2018

    Bogota, Colombia

    Elixir node event
    CABANA Workshop: Untapping diversity through Metagenomics: An Introductory Workshop https://tess.elixir-europe.org/events/cabana-workshop-untapping-diversity-through-metagenomics-an-introductory-workshop In this course participants will learn the basics of metagenomics, covering experimental design and workflows, moving through to microbiome analysis via amplicon sequencing and shotgun metagenomics. 2018-12-03 08:30:00 UTC 2018-12-06 17:30:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Alejandro Reyes [] [] [] [] HDRUK
  • OpenRiskNet/NanoCommons ontology meeting

    13 - 14 December 2018

    Brussels, Belgium

    OpenRiskNet/NanoCommons ontology meeting https://tess.elixir-europe.org/events/openrisknet-nanocommons-ontology-meeting The goal of this meeting is to get a picture of the ongoing ontology activities in the toxicology area, harmonize these efforts and the developed ontologies therein, and extend the existing toxicology ontology to support OpenRiskNet and NanoCommons tasks. Part of this will be the ontological annotation of OpenRiskNet Application Programming Interfaces (APIs) as used on their cloud. Other goals include extension of the ontology with missing terms (if any), potentially write up guidance documents, and annotation of data sets (possible via OpenRiskNet data APIs). 2018-12-13 13:00:00 UTC 2018-12-14 14:00:00 UTC University of Birmingham office in Brussels, Brussels, Belgium University of Birmingham office in Brussels Brussels Belgium Ontology and terminology Toxicology [] NanoCommonsOpenRiskNetH2020 [] workshops_and_courses [] risk assessmentnanosafetydata annotationservice descriptions
  • Ensembl Browser Workshop, Bogota, 11 February 2019

    11 February 2019

    Bogota, Colombia

    Elixir node event
    Ensembl Browser Workshop, Bogota, 11 February 2019 https://tess.elixir-europe.org/events/ensembl-browser-workshop-bogota-11-february-2019 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2019-02-11 09:00:00 UTC 2019-02-11 17:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] HDRUK
  • Ensembl REST API Workshop, Bogota, 12 February 2018

    12 February 2019

    Bogota, Colombia

    Elixir node event
    Ensembl REST API Workshop, Bogota, 12 February 2018 https://tess.elixir-europe.org/events/ensembl-rest-api-workshop-bogota-12-february-2018 Work with Ensembl to master the Ensembl REST APIs and flexibly access genome-wide data, such as genes, variants, regulatory features, homologues and alignments. 2019-02-12 09:00:00 UTC 2019-02-12 15:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] []
  • Ensembl REST API Workshop, Bogota, 12 February 2019

    12 February 2019

    Bogota, Colombia

    Elixir node event
    Ensembl REST API Workshop, Bogota, 12 February 2019 https://tess.elixir-europe.org/events/ensembl-rest-api-workshop-bogota-12-february-2019 Work with Ensembl to master the Ensembl REST APIs and flexibly access genome-wide data, such as genes, variants, regulatory features, homologues and alignments. 2019-02-12 09:00:00 UTC 2019-02-12 15:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] HDRUK
  • Integrative X-omics analyses empowering personalized healthcare

    1 - 5 July 2019

    Nijmegen, Netherlands

    Elixir node event
    Integrative X-omics analyses empowering personalized healthcare https://tess.elixir-europe.org/events/integrative-x-omics-analyses-empowering-personalized-healthcare In this course you will receive high profile lectures and practical training on the integrated use of molecular-omics technologies in personalized prevention, diagnostics and treatment, to optimize your experimental and analysis strategies. Molecular indicators for health, disease and response to… The post Integrative X-omics analyses empowering personalized healthcare appeared first on Dutch Techcentre for Life Sciences. 2019-07-01 09:00:00 UTC 2019-07-05 00:00:00 UTC Nijmegen, Netherlands, Nijmegen, Netherlands Nijmegen, Netherlands Nijmegen Netherlands [] [] [] workshops_and_courses [] []
  • Introduction to Python for Biologists

    12 - 16 August 2019

    Liverpool, United Kingdom

    Introduction to Python for Biologists https://tess.elixir-europe.org/events/introduction-to-python-for-biologists-965f36b3-e040-43cd-bb06-f4e5e3cc588e Registration fee: £500 Places: 15 (first come, first served) Application deadline: 14th June 2019 DESCRIPTION Python is a dynamic, readable language that is a popular platform for all types of bioinformatics work, from simple one-off scripts to large, complex software projects. This workshop is aimed at complete beginners and assumes no prior programming experience. It gives an overview of the language with an emphasis on practical problem-solving, using examples and exercises drawn from various aspects of bioinformatics work. The workshop is structured so that the parts of the language most useful for bioinformatics are introduced as early as possible, and that students can start writing plausibly-useful programs after the first few sessions. After completing the workshop, students should be in a position to (1) apply the skills they have learned to tackling problems in their own research and (2) continue their Python education in a self-directed way. The instructor of the workshop is the Founder of Python for Biologists, Dr. Martin Jones. Format The workshop will take place over 5 days. Each day will consist of 2 half-day sessions, each consisting of a ~1 hour lecture followed by 2 hours of practical exercises. It is important that attendees attend each session as they will use examples and exercises that build on the materials from previous sessions. For more information and a detailed syllabus please see the following link: https://pythonforbiologists.com/introduction-to-python-for-biologists Who should attend This workshop is aimed at all researchers and technical workers with a background in biology who want to learn programming. The syllabus has been planned with complete beginners in mind. Requirements Attendees will require a level of biological and bioinformatics background so they can appreciate the examples and exercises (i.e. they should know what a protein accession number, BLAST report, and FASTA sequence is). Attendees will require the ability to us a text editor (e.g. nano, vim, or gedit). No previous programming knowledge is required. Attendees will use their own laptops during the workshop. Instructions for any software to be installed will be sent out prior to the course. If you are not sure if this course is suitable for you please do not hesitate to contact Dr Martin Jones (martin@pythonforbiologists.com) Please fill in the following form (https://forms.gle/mkjiASxS7sKBxeGo7) if you would like to register for the Introduction to Python for Biologists workshop. Applicants will be asked to pay a registration fee of £500. After the application deadline (14th of June) or when all places are fill applicants will be asked to pay for the workshop. Once your fee is paid your place on the course will be confirmed. 2019-08-12 09:00:00 UTC 2019-08-16 17:00:00 UTC Centre for Genomic Research, University of Liverpool (https://www.liverpool.ac.uk/genomic-research/) 126 Mount Pleasant, 126, Mount Pleasant, Liverpool, United Kingdom 126 Mount Pleasant, 126, Mount Pleasant Liverpool Merseyside United Kingdom L3 5SR University of Liverpool [] [] 15 workshops_and_courses [] pythonbioinformaticsprogrammingintrobeginner
  • Bioinformatics tools to predict protein properties from sequence

    10 September 2019

    Brussels, Belgium

    Elixir node event
    Bioinformatics tools to predict protein properties from sequence https://tess.elixir-europe.org/events/bioinformatics-tools-to-predict-protein-properties-from-sequence In this workshop, we address how to predict features of proteins from their sequence only, using Python scripts to access APIs of web services available online. We will introduce single-sequence based predictions of biophysical characteristics of proteins (e.g. DynaMine for backbone dynamics), methods that use multiple sequence alignments (e.g. I-TASSER), and methods that determine the difference between a protein and its mutant form (e.g. DEOGEN2). We will also show how the results of these predictions can be combined and analysed using a protein case study. 2019-09-10 09:00:00 UTC 2019-09-10 00:00:00 UTC VIB Bioinformatics Core U-Residence Brussels, Brussels, Belgium U-Residence Brussels Brussels Belgium 1050 [] [] [] [] [] []
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