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21 events found

City: Bogota  or Brussels  or Nijmegen  or Liverpool  or Norwich  or Kuala Lumpur 

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Keywords: protein sequence   or TGAC 

  • Galaxy workshop

    12 April 2013

    Norwich, United Kingdom

    Galaxy workshop https://tess.elixir-europe.org/events/galaxy-workshop 2013-04-12 00:00:00 UTC 2013-04-12 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Browsing plant and pathogen genomes with Ensembl Genomes

    7 June 2013

    Norwich, United Kingdom

    Browsing plant and pathogen genomes with Ensembl Genomes https://tess.elixir-europe.org/events/browsing-plant-and-pathogen-genomes-with-ensembl-genomes 2013-06-07 00:00:00 UTC 2013-06-07 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Browsing livestock genomes with Ensembl

    28 June 2013

    Norwich, United Kingdom

    Browsing livestock genomes with Ensembl https://tess.elixir-europe.org/events/browsing-livestock-genomes-with-ensembl 2013-06-28 00:00:00 UTC 2013-06-28 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Hands on Training Workshop: From pathways to networks - from in vivo to in silico and backwards

    8 July 2013

    Norwich, United Kingdom

    Hands on Training Workshop: From pathways to networks - from in vivo to in silico and backwards https://tess.elixir-europe.org/events/hands-on-training-workshop-from-pathways-to-networks-from-in-vivo-to-in-silico-and-backwards 2013-07-08 01:00:00 UTC 2013-07-08 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Systems biology Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Half-day workshop: Basic Principles of R

    16 August 2013

    Norwich, United Kingdom

    Half-day workshop: Basic Principles of R https://tess.elixir-europe.org/events/half-day-workshop-basic-principles-of-r 2013-08-16 01:00:00 UTC 2013-08-16 01:00:00 UTC TGAC The Genome Analysis Centre, Norwich, United Kingdom The Genome Analysis Centre Norwich United Kingdom NR4 7UH Statistics and probability Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Workshop on data science using R

    6 September 2013

    Norwich, United Kingdom

    Workshop on data science using R https://tess.elixir-europe.org/events/workshop-on-data-science-using-r 2013-09-06 01:00:00 UTC 2013-09-06 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Statistics and probability Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • The Ensembl Core API

    20 September 2013

    Norwich, United Kingdom

    The Ensembl Core API https://tess.elixir-europe.org/events/the-ensembl-core-api 2013-09-20 00:00:00 UTC 2013-09-20 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Python for Life Scientists

    8 - 12 October 2013

    Norwich, United Kingdom

    Python for Life Scientists https://tess.elixir-europe.org/events/python-for-life-scientists-580e2a48-bdf1-4e77-bad6-a2a92d648ff1 2013-10-08 00:00:00 UTC 2013-10-12 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • Bootcamp for Bioinformaticians

    6 November 2013

    Norwich, United Kingdom

    Bootcamp for Bioinformaticians https://tess.elixir-europe.org/events/bootcamp-for-bioinformaticians 2013-11-06 00:00:00 UTC 2013-11-06 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • NGS Data Analysis Bootcamp for Biologists

    7 November 2013

    Norwich, United Kingdom

    NGS Data Analysis Bootcamp for Biologists https://tess.elixir-europe.org/events/ngs-data-analysis-bootcamp-for-biologists 2013-11-07 00:00:00 UTC 2013-11-07 00:00:00 UTC TGAC The Genome Analysis Centre, Norwich, United Kingdom The Genome Analysis Centre Norwich United Kingdom Bioinformatics [] [] [] workshops_and_courses [] TGACbionformatics
  • Analysing RNA-seq data

    12 - 13 December 2013

    Norwich, United Kingdom

    Analysing RNA-seq data https://tess.elixir-europe.org/events/analysing-rna-seq-data 2013-12-12 00:00:00 UTC 2013-12-13 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom Transcriptomics Bioinformatics [] [] [] workshops_and_courses [] TGAC
  • TGAC Software Carpentry Bootcamp

    3 - 4 February 2014

    Norwich, United Kingdom

    TGAC Software Carpentry Bootcamp https://tess.elixir-europe.org/events/tgac-software-carpentry-bootcamp 2014-02-03 00:00:00 UTC 2014-02-04 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • De novo Assembly

    3 - 6 March 2014

    Norwich, United Kingdom

    De novo Assembly https://tess.elixir-europe.org/events/de-novo-assembly 2014-03-03 00:00:00 UTC 2014-03-06 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • Scientific Meeting 2014 "NGS Data after the Gold Rush" & Management Committee Meeting

    6 - 8 May 2014

    Norwich, United Kingdom

    Scientific Meeting 2014 "NGS Data after the Gold Rush" & Management Committee Meeting https://tess.elixir-europe.org/events/scientific-meeting-2014-ngs-data-after-the-gold-rush-management-committee-meeting 2014-05-06 01:00:00 UTC 2014-05-08 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Bioinformatics [] [] [] meetings_and_conferences [] TGAC
  • SeqAhead: NGS current challenges and data analysis for plant researchers

    19 - 23 May 2014

    Norwich, United Kingdom

    SeqAhead: NGS current challenges and data analysis for plant researchers https://tess.elixir-europe.org/events/seqahead-ngs-current-challenges-and-data-analysis-for-plant-researchers 2014-05-19 01:00:00 UTC 2014-05-23 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • TGAC Summer School: A walk through Bioinformatics

    2 - 6 June 2014

    Norwich, United Kingdom

    TGAC Summer School: A walk through Bioinformatics https://tess.elixir-europe.org/events/tgac-summer-school-a-walk-through-bioinformatics 2014-06-02 01:00:00 UTC 2014-06-06 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • Metagenomics: From bench to data analysis

    8 - 12 September 2014

    Norwich, United Kingdom

    Metagenomics: From bench to data analysis https://tess.elixir-europe.org/events/metagenomics-from-bench-to-data-analysis-c1e58d99-e86f-40ca-9a4a-c86a6b54b57d 2014-09-08 01:00:00 UTC 2014-09-12 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH [] [] [] workshops_and_courses [] TGACbioinformatics
  • TGAC - AllBio: Open Science & Reproducibility Best Practice Workshop

    15 - 17 September 2014

    Norwich, United Kingdom

    TGAC - AllBio: Open Science & Reproducibility Best Practice Workshop https://tess.elixir-europe.org/events/tgac-allbio-open-science-reproducibility-best-practice-workshop 2014-09-15 01:00:00 UTC 2014-09-17 01:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom Genomics Bioinformatics [] [] [] meetings_and_conferences [] TGAC
  • Training School: genotyping by sequencing

    3 - 7 November 2014

    Norwich, United Kingdom

    Training School: genotyping by sequencing https://tess.elixir-europe.org/events/training-school-genotyping-by-sequencing 2014-11-03 00:00:00 UTC 2014-11-07 00:00:00 UTC TGAC The Genome Analysis Centre (TGAC), Norwich, United Kingdom The Genome Analysis Centre (TGAC) Norwich United Kingdom NR4 7UH Genomics Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • Metagenomics: From bench to data analysis

    12 - 16 October 2015

    Norwich, United Kingdom

    Metagenomics: From bench to data analysis https://tess.elixir-europe.org/events/metagenomics-from-bench-to-data-analysis 2015-10-12 01:00:00 UTC 2015-10-16 01:00:00 UTC TGAC TGAC, Norwich, United Kingdom TGAC Norwich United Kingdom NR4 7UH Metagenomics Bioinformatics [] [] [] workshops_and_courses [] TGACbioinformatics
  • Multiple Sequence Alignment with Jalview and Protein Structure and Function Modelling

    14 - 15 May 2018

    Liverpool, United Kingdom

    Elixir node event
    Multiple Sequence Alignment with Jalview and Protein Structure and Function Modelling https://tess.elixir-europe.org/events/multiple-sequence-alignment-with-jalview-and-protein-structure-and-function Date: Monday 14th to Tuesday 15th May 2018 Time: 9.00 to 17.00 Location: MSTC, Sherrington Building, University of Liverpool, L69 3BX Overview This two day hands-on training course is aimed at students and researchers who want to gain practical understanding of the tools and approaches for protein sequence, structure and function prediction and analysis. In day 1, participants will be introduced to Jalview - a free desktop application for the visualisation and comparative analysis of protein, DNA and RNA sequences. Jalview can integrate data from Ensembl, Uniprot, PDBe, Rfam and Pfam, and can access a range of tools for multiple sequence alignment, conservation analysis and secondary structure and disorder prediction, including the widely used JPred4. On the second day, participants will learn to use Jalview’s 3D structure visualisation capabilities in conjunction with UCSF Chimera, and take a whistle-stop tour of the methodologies and tools for prediction and analysis of Protein 3D structure and function. Participants are encouraged to bring their own protein analysis problems and time will be reserved at the end of day 2 for discussion. Register using the link on the Jalview website: http://www.jalview.org/training/training-courses/Multiple-Sequence-Alignment-with-Jalview-and-Protein-Structure-and Day 1: Multiple Sequence Alignment and Analysis with Jalview Workshop trainers: Dr Jim Procter and Dr Suzanne Duce 9 9.15 Introduction to the Workshop 9.15 10.30 Session 1.Loading sequences, structures and alignments with Jalview Coffee break 11 12.30 Session 2. Multiple alignment Creation and Alignment Reliability Lunch 1.30 3pm Session 3. Phylogenetic trees and subfamily analysis of Proteins and CDS Coffee break 3.30 5pm Session 4. Protein secondary structure and disorder prediction, and working with annotation Day 2: Protein Structure Analysis and Modelling Workshop trainers: Dr Jim Procter and Dr Dan Rigden 9 9.15 Introduction to Workshop Day 2 9.15 9.30 Introduction to Protein 3D Structure 9.30 10 Viewing and Comparing 3D structures with Jalview and UCSF Chimera 10 10.30 Mapping sequence conservation to Biological Assemblies with Jalview Coffee Break 11 12.30 Functional analysis of Protein Structures Lunch 1.30 2.30 Homology modelling and model quality evaluation 2.30 3.15 Ab initio models and searching for fold matches 3.15 3.30 Wrap up: Function Analysis and 3D models Coffee Break 4pm 5pm Analyse your own protein sequences and structures. 2018-05-14 09:00:00 UTC 2018-05-15 17:00:00 UTC Dr Jim Procter and Dr Dan Rigden MSTC, Sherrington Building, University of Liverpool, Liverpool, United Kingdom MSTC, Sherrington Building, University of Liverpool Liverpool Merseyside United Kingdom L69 3BX University of Liverpool Dr Jim Procter and Dr Suzanne Duce, School of Life Sciences, University of Dundee, Dundee University of Dundee PhD studentspostdoctoral researchersprinciple investigatorsLife Science Researchersbioinformaticians 45 workshops_and_courses registration_of_interest Jalviewmultiple sequence alignmentMSAprotein sequence protein structure protein predictionHomology modellingAb initio modelsChimerasubfamily analysisPhylogenetic treesProtein secondary structureUniversity of DundeeUniversity of Liverpool
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