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  • Introduction to Python for Biologists

    2 - 6 March 2020

    Liverpool, United Kingdom

    Introduction to Python for Biologists https://tess.elixir-europe.org/events/introduction-to-python-for-biologists-789ef24a-854b-40c2-86b6-398ac0ef9cbd 2020-03-02 09:00:00 UTC 2020-03-06 17:00:00 UTC Matthew Gemmell University of Liverpool, Life Science Building, Crown Street, Liverpool, United Kingdom University of Liverpool, Life Science Building, Crown Street Liverpool Merseyside United Kingdom L69 7ZB University of Liverpool [] BeginnersBiologists 25 [] first_come_first_served Python for Biologists
  • Data Carpentry

    3 - 4 March 2020

    Norwich, United Kingdom

    Data Carpentry https://tess.elixir-europe.org/events/data-carpentry-6bde217e-337f-4bea-96f7-e419c62f5fe9 Data Carpentry workshops are for any researcher who has data they want to analyse, and no prior computational experience is required. This hands-on workshop teaches basic concepts, skills and tools for working more effectively with data. 2020-03-03 09:00:00 UTC 2020-03-04 17:00:00 UTC Earlham Institute Earlham Institute (EI), Colney Lane, Norwich, United Kingdom Earlham Institute (EI), Colney Lane Norwich Norfolk United Kingdom NR4 7UZ Earlham Institute training@earlham.ac.uk [] post-docsPhD studentspostgrad workshops_and_courses first_come_first_served Data carpentryCommand lineData analysis
  • De Novo Assembly 2020

    12 March 2020

    Norwich, United Kingdom

    De Novo Assembly 2020 https://tess.elixir-europe.org/events/de-novo-assembly-2020 The course will provide an introduction to de novo assembly, with a hands on introduction followed by in-depth analysis of the key steps in the process. It covers several aspects such as the initial setup of a de novo genome sequencing project, quality control and preprocessing of datasets, generation and evaluation of first pass assemblies and assembly improvement. 2020-03-12 09:00:00 UTC 2020-03-12 17:00:00 UTC Earlham Institute Earlham Institute (EI), Colney Lane, Norwich, United Kingdom Earlham Institute (EI), Colney Lane Norwich Norfolk United Kingdom NR4 7UZ Earlham Institute training@earlham.ac.uk [] PhD studentspost-docs workshops_and_courses [] De Novode-novo genome assembly
  • CABANA Workshop: Analysis of Crop Genomics Data

    16 - 20 March 2020

    Bogota, Colombia

    Elixir node event
    CABANA Workshop: Analysis of Crop Genomics Data https://tess.elixir-europe.org/events/cabana-workshop-analysis-of-crop-genomics-data-0d1c7271-613b-4672-bac5-19f641f9be70 This course will introduce crop biologists to methods and approaches for analysing crop genomics data. 2020-03-16 08:30:00 UTC 2020-03-20 12:30:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Marco Cristancho [] [] [] [] HDRUK
  • Best practices in High-Perfomance Computing (sciCORE cluster)

    18 March 2020

    Basel, Switzerland

    Elixir node event
    Best practices in High-Perfomance Computing (sciCORE cluster) https://tess.elixir-europe.org/events/best-practices-in-high-perfomance-computing-scicore-cluster Overview This one-day course is a follow-up to the sciCORE course "Introduction to HPC (sciCORE cluster)". 2020-03-18 09:00:00 UTC 2020-03-18 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • R for data science

    31 March - 3 April 2020

    Liverpool, United Kingdom

    R for data science https://tess.elixir-europe.org/events/r-for-data-science The course covered content for these learning objectives: To write your own custom functions To use for loops, apply functions and if statements To analyse large matrices of data in a semi-automated way To normalise data To quantify and correct batch effect To undertake the most common clustering algorithms including k-means and hierarchical To perform variable selection and present these results in different plots including heatmaps To do 2-way ANOVA To undertake multivariate modelling A brief introduction to machine learning. The course included brief theoretical introductions followed by hands on exercises based on real life research examples. 2020-03-31 09:00:00 UTC 2020-04-03 17:00:00 UTC Computational Biology Facility University of Liverpool, Liverpool, United Kingdom University of Liverpool Liverpool Merseyside United Kingdom L69 3GH Statistics and probability Bioinformatics University of Liverpool Computational Biology Facility (cbf@liverpool.ac.uk) [] [] 20 workshops_and_courses registration_of_interest R ProgrammingStatistical-model Statistics Pre-processingTranscriptomicsMetabolomicsProteomics
  • R for beginners

    1 - 3 April 2020

    Liverpool, United Kingdom

    R for beginners https://tess.elixir-europe.org/events/r-for-beginners R is a programming language and free software environment for statistical computing and graphics supported by the R Foundation for Statistical Computing. This course covers: Day 1: Foundations of R: get familiar with R, R studio, operators, variables, functions, directories and the script editor Day 2: Visualisation in basic R (boxplots, scatterplots, line graphs and histograms) and ggplot2 (same types of plots and also manipulation of data for use within this package as well as simple linear regression) Day 3: Introduction to statistical analyses in R: univariate statistics (choosing the right test, checking data assumptions, calculating and extracting the values to report in publications) and Principal Component Analysis (calculation and visualisation with ggplot2) Extra materials: Introduction to the Tidyverse, Introduction to for loops All materials have been built using relevant life sciences/clinical examples. The course has been designed to introduce R from the very basics. Therefore applicants do not need any prior experience to attend, just the desire to learn R. Real life examples with bioinformatic applications are included. 2020-04-01 09:00:00 UTC 2020-04-03 17:00:00 UTC Computational Biology Facility University of Liverpool, Liverpool, United Kingdom University of Liverpool Liverpool Merseyside United Kingdom L69 3GH Computational biology Statistics and probability University of Liverpool Computational Biology Facility (cbf@liverpool.ac.uk) [] [] workshops_and_courses first_come_first_served R-programmingbiostatistics Statistics R programminglife sciences, bioinformaticsClinical Bioinformatics
  • Metagenomics Workshop

    15 - 17 April 2020

    Liverpool

    Metagenomics Workshop https://tess.elixir-europe.org/events/metagenomics-workshop 2020-04-15 09:00:00 UTC 2020-04-17 16:00:00 UTC Matthew Gemmell Sherrington Building, Ashton Street, University of Liverpool, Liverpool Sherrington Building, Ashton Street, University of Liverpool Liverpool United Kingdom L69 3GE [] [] [] 50 workshops_and_courses [] Metagenomics
  • First steps with R in Life Sciences

    16 - 17 April 2020

    Basel, Switzerland

    Elixir node event
    First steps with R in Life Sciences https://tess.elixir-europe.org/events/first-steps-with-r-in-life-sciences-52ebf63a-a4fb-4898-8b44-212e3eced3c5 --> Overview R is a complete, flexible and open source system for statistical analysis and graphics, which has become a tool of choice for biologists and biomedical scientists who need to analyse and visualise large amounts of data. 2020-04-16 09:00:00 UTC 2020-04-17 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Single-Cell RNAseq Training Course 2020

    20 - 25 April 2020

    Norwich, United Kingdom

    Single-Cell RNAseq Training Course 2020 https://tess.elixir-europe.org/events/single-cell-rnaseq-training-course-2020-1444ff72-59f8-4c26-bc86-813bc4ee8efd The course will provide an introduction to Single-Cell Genomics for bench-based researchers with no required prior experience of computational data analysis. It covers several aspects such as the experimental design, cell sorting and processing for production of high-quality samples for sequencing, generation of sequencing data, assessing the quality of sequence data, data visualisation, differential expression analyses and identifying Copy Number Variations at the single-cell level. Options when applying are: Single-Cell RNAseq Course (Mon-Fri: lab and bioinformatics @800) Single-Cell RNAseq Bioinformatics only (Weds-Fri @£300) 2020-04-20 09:00:00 UTC 2020-04-25 00:00:00 UTC Earlham Institute Earlham Institute (EI), Colney Lane, Norwich, United Kingdom Earlham Institute (EI), Colney Lane Norwich Norfolk United Kingdom NR4 7UZ [] training @ earlham . ac . uk [] PhD studentspost-docsBench biologists workshops_and_courses registration_of_interest []
  • Genome Annotation Workshop 2020

    13 May 2020

    Norwich, United Kingdom

    Genome Annotation Workshop 2020 https://tess.elixir-europe.org/events/genome-annotation-workshop-2020 With the fast-moving pace of sequencing technology and the plethora of options available to you, it can be difficult to know which is the optimal platform for your biological question and therefore how to design your experiment for maximum return from your samples. Once you’ve got the data, how do you know if what you’ve got is good enough quality? We’ll take you through the latest developments in sequencing technology, identify common challenges in producing good RNA for sequencing, help you to understand what you can expect from your data and what you can do with it. 2020-05-13 09:00:00 UTC 2020-05-13 17:00:00 UTC Earlham Institute Earlham Institute (EI), Colney Lane, Norwich, United Kingdom Earlham Institute (EI), Colney Lane Norwich Norfolk United Kingdom NR4 7UZ Earlham Institute training@earlham.ac.uk [] Advanced PhD studentspost-docs [] first_come_first_served genome annotationNext Generation Sequencing technologies
  • First Steps with Python in Life Sciences

    18 - 20 May 2020

    Basel, Switzerland

    Elixir node event
    First Steps with Python in Life Sciences https://tess.elixir-europe.org/events/first-steps-with-python-in-life-sciences-d45a8059-cedd-4e69-bcac-8da973f4496d Overview Python is an open-source and general-purpose scripting language which runs on all major operating systems. 2020-05-18 09:00:00 UTC 2020-05-20 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First Steps with Python in Life Sciences

    18 - 20 May 2020

    Basel, Switzerland

    Elixir node event
    First Steps with Python in Life Sciences https://tess.elixir-europe.org/events/first-steps-with-python-in-life-sciences-402cdbc1-5a65-4f48-8581-994a44441dc5 Overview Python is an open-source and general-purpose scripting language which runs on all major operating systems. 2020-05-18 09:00:00 UTC 2020-05-20 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Advanced topics in single-cell transcriptomics

    27 - 29 May 2020

    Basel, Switzerland

    Elixir node event
    Advanced topics in single-cell transcriptomics https://tess.elixir-europe.org/events/advanced-topics-in-single-cell-transcriptomics More information soon 2020-05-27 09:00:00 UTC 2020-05-29 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to high-performance computing (sciCORE cluster)

    3 June 2020

    Basel, Switzerland

    Elixir node event
    Introduction to high-performance computing (sciCORE cluster) https://tess.elixir-europe.org/events/introduction-to-high-performance-computing-scicore-cluster-17743d87-92b4-473f-9591-384d43fe776d Overview This full-day course has a practical focus, where participants will learn how to use the Linux command line and interact with the sciCORE cluster. All new users of sciCORE are strongly encouraged to follow this course. 2020-06-03 09:00:00 UTC 2020-06-03 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • First steps in Python, and more!

    9 - 11 June 2020

    Basel, Switzerland

    Elixir node event
    First steps in Python, and more! https://tess.elixir-europe.org/events/first-steps-in-python-and-more Overview Python is an open-source and general-purpose scripting language which runs on all major operating systems. 2020-06-09 09:00:00 UTC 2020-06-11 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Protein Bioinformatics: Sequence-Structure-Function - Dates to be confirmed

    18 - 20 November 2020

    Basel, Switzerland

    Elixir node event
    Protein Bioinformatics: Sequence-Structure-Function - Dates to be confirmed https://tess.elixir-europe.org/events/protein-bioinformatics-sequence-structure-function-dates-to-be-confirmed Overview Sequence-structure-function relationships of proteins are central to a comprehensive understanding of cellular biology. However, many proteins lack direct and detailed information regarding structure, function, and complex formation. 2020-11-18 09:00:00 UTC 2020-11-20 00:00:00 UTC SIB, Basel, Switzerland SIB Basel Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
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