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36 events found

City: Bogota  or Brussels  or Liverpool  or Gent  or Zwijnaarde 

and

Content provider: OpenRiskNet  or VIB Bioinformatics Core 

  • Introduction to gene regulation

    9 October 2017

    Gent, Belgium

    Elixir node event
    Introduction to gene regulation https://tess.elixir-europe.org/events/introduction-to-gene-regulation 2017-10-09 09:30:00 UTC 2017-10-09 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Gent, Belgium Bio-Accelerator Gent Belgium 9052 [] [] [] [] [] []
  • Electronic Lab Notebook Introduction Ghent

    25 October 2017

    Gent, Belgium

    Elixir node event
    Electronic Lab Notebook Introduction Ghent https://tess.elixir-europe.org/events/electronic-lab-notebook-introduction-ghent-fcc80d61-9755-4fe2-8067-00f12ea03c2f 2017-10-25 10:00:00 UTC 2017-10-25 12:00:00 UTC VIB Bioinformatics Core PC Room V114 First floor front building VIB Research Building, Gent, Belgium PC Room V114 First floor front building VIB Research Building Gent Belgium 9052 [] [] [] [] [] []
  • Analysis of public microarray data using Genevestigator

    24 November 2017

    Gent, Belgium

    Elixir node event
    Analysis of public microarray data using Genevestigator https://tess.elixir-europe.org/events/analysis-of-public-microarray-data-using-genevestigator 2017-11-24 09:30:00 UTC 2017-11-24 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Gent, Belgium Bio-Accelerator Gent Belgium 9052 [] [] [] [] [] []
  • Gentle hands-on introduction to Python programming

    22 - 29 January 2018

    Gent, Belgium

    Elixir node event
    Gentle hands-on introduction to Python programming https://tess.elixir-europe.org/events/gentle-hands-on-introduction-to-python-programming 2018-01-22 09:30:00 UTC 2018-01-29 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Gent, Belgium Bio-Accelerator Gent Belgium 9052 [] [] [] [] [] []
  • A tour of machine learning - Dimensionality reduction and clustering

    23 April 2018

    Gent, Belgium

    Elixir node event
    A tour of machine learning - Dimensionality reduction and clustering https://tess.elixir-europe.org/events/a-tour-of-machine-learning-dimensionality-reduction-and-clustering In this course, you will be introduced to two broad classes of data mining techniques that can be useful when dealing with high-dimensional data: techniques based on dimensionality reduction and techniques based on clustering. This course is intended for people with experience in R. 2018-04-23 09:30:00 UTC 2018-04-23 17:00:00 UTC VIB Bioinformatics Core BioAccelerator, Gent, Belgium BioAccelerator Gent Belgium 9052 [] [] [] [] [] []
  • Ensembl REST API Workshop

    14 May 2018

    Gent, Belgium

    Elixir node event
    Ensembl REST API Workshop https://tess.elixir-europe.org/events/ensembl-rest-api-workshop-cacab7f0-969e-47e7-87d0-14b7e0115671 2018-05-14 09:30:00 UTC 2018-05-14 13:00:00 UTC VIB Bioinformatics Core BioAccelerator, Gent, Belgium BioAccelerator Gent Belgium 9052 [] [] [] [] [] []
  • Basic bioinformatics concepts, databases and tools

    4 - 18 June 2018

    Gent, Belgium

    Elixir node event
    Basic bioinformatics concepts, databases and tools https://tess.elixir-europe.org/events/basic-bioinformatics-concepts-databases-and-tools b'\r\n\nUnderstand the capabilities and pitfalls of bioinformatics.\r\nFunctioning of the most used bioinformatics algorithms and terms for reliable interpretation of the results.\r\nNavigate with confidence to numerous online data repositories. Know where to search for them.\r\nBasic analyses of single genes as well as groups of genes (gene lists)\n\r\n\r\n\n During this 3-day introduction to bioinformatics, we will take you along a guided tour that covers all basic aspects of biological sequence analysis. This workshop is an ideal opportunity to get familiar with bioinformatics and its many faces! At the end, you should be able to start tackling any basic bioinformatics problem: how to obtain relevant information about your gene, you know where to get the required sequence data, manipulate the sequences, and how basic software and algorithms function so you can fine-tune them in order the get the most out of your analysis.\r\n\n \n\nGenBank, SwissProt, RefSeq, Gene\r\nGQuery\r\nEnsembl\r\nUgene\n\r\nBLAST, OrthoMCL, EMBOSS Needle, EMBOSS Water, Muscle, WebLogo, iceLogo\r\nHMMER, PSIBLAST, PROSITE, SMART, InterPro\r\nmiRWalk, Pscan, Motiflab\r\nPrimer3 PLUS, Primer BLAST, OligoAnalyzer, Ambion siRNA finder\r\nEMBOSS, Mobyle, Expasy\r\nPDB, Yasara\r\nGO, AmiGO, QuickGO, KEGG, STRING, DAVID, ToppGene, EnrichR, WebGestalt, Cytoscape\r\nGEO, GEO2R, GEO DataSet Browser\r\nOMIM, Variant reporter, Genomic variation server\n\r\nBiomart\n\r\n​​​​​​​​\r\n\n' 2018-06-04 09:30:00 UTC 2018-06-18 17:00:00 UTC VIB Bioinformatics Core BioAccelerator, Gent, Belgium BioAccelerator Gent Belgium 9052 [] [] [] [] [] []
  • Data Carpentry June 2018

    12 - 13 June 2018

    Brussels, Belgium

    Elixir node event
    Data Carpentry June 2018 https://tess.elixir-europe.org/events/data-carpentry-june-2018 2018-06-12 09:30:00 UTC 2018-06-13 17:00:00 UTC ELIXIR Belgium Brussels, Belgium Brussels Belgium 1050 [] [] [] [] [] []
  • Basic statistics in R, part II

    25 - 1 June 2018

    Gent, Belgium

    Elixir node event
    Basic statistics in R, part II https://tess.elixir-europe.org/events/basic-statistics-in-r-part-ii 2018-06-25 09:30:00 UTC 2018-06-01 17:00:00 UTC VIB Bioinformatics Core BioAccelerator, Gent, Belgium BioAccelerator Gent Belgium 9052 [] [] [] [] [] []
  • Git for humans

    25 June 2018

    Gent, Belgium

    Elixir node event
    Git for humans https://tess.elixir-europe.org/events/git-for-humans 2018-06-25 09:30:00 UTC 2018-06-25 12:30:00 UTC ELIXIR Belgium Campus: Boekentoren/Book Tower Room: Didacticum, Gent, Belgium Campus: Boekentoren/Book Tower Room: Didacticum Gent Belgium 9000 [] [] [] [] [] []
  • VIB Community Meeting - Bioinformatics and Computational Biology

    6 September 2018

    Brussels, Belgium

    Elixir node event
    VIB Community Meeting - Bioinformatics and Computational Biology https://tess.elixir-europe.org/events/vib-community-meeting-bioinformatics-and-computational-biology b'\r\n\r\n\n \r\n\r\n\n \r\n\n' 2018-09-06 09:30:00 UTC 2018-09-06 16:00:00 UTC VIB Bioinformatics Core U-Residence, Brussels, Belgium U-Residence Brussels Belgium 1050 [] [] [] [] [] []
  • Comparative genomics in eukaryotes

    16 October 2018

    Gent, Belgium

    Elixir node event
    Comparative genomics in eukaryotes https://tess.elixir-europe.org/events/comparative-genomics-in-eukaryotes-9b93222d-3432-4065-a24e-3b9be0337a6d b'\r\n\r\n\n \r\n\r\n\n \r\n\r\n\n \r\n\r\n\n   9h30-11h00  Introduction + Gene family analysis\r\n\n' 2018-10-16 09:30:00 UTC 2018-10-16 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Gent, Belgium Bio-Accelerator Gent Belgium 9052 [] [] [] [] [] []
  • Mass spectrometry data processing

    22 - 23 October 2018

    Gent, Belgium

    Elixir node event
    Mass spectrometry data processing https://tess.elixir-europe.org/events/mass-spectrometry-data-processing 2018-10-22 09:30:00 UTC 2018-10-23 17:00:00 UTC VIB Bioinformatics Core BioAccelerator, Gent, Belgium BioAccelerator Gent Belgium 9052 [] [] [] [] [] []
  • OpenRiskNet/NanoCommons ontology meeting

    13 - 14 December 2018

    Brussels, Belgium

    OpenRiskNet/NanoCommons ontology meeting https://tess.elixir-europe.org/events/openrisknet-nanocommons-ontology-meeting The goal of this meeting is to get a picture of the ongoing ontology activities in the toxicology area, harmonize these efforts and the developed ontologies therein, and extend the existing toxicology ontology to support OpenRiskNet and NanoCommons tasks. Part of this will be the ontological annotation of OpenRiskNet Application Programming Interfaces (APIs) as used on their cloud. Other goals include extension of the ontology with missing terms (if any), potentially write up guidance documents, and annotation of data sets (possible via OpenRiskNet data APIs). 2018-12-13 13:00:00 UTC 2018-12-14 14:00:00 UTC University of Birmingham office in Brussels, Brussels, Belgium University of Birmingham office in Brussels Brussels Belgium Ontology and terminology Toxicology [] NanoCommonsOpenRiskNetH2020 [] workshops_and_courses [] risk assessmentnanosafetydata annotationservice descriptions
  • VIB Interest Group Meeting - containers and workflows

    25 January 2019

    Gent, Belgium

    Elixir node event
    VIB Interest Group Meeting - containers and workflows https://tess.elixir-europe.org/events/vib-interest-group-meeting-containers-and-workflows 2019-01-25 09:30:00 UTC 2019-01-25 16:30:00 UTC VIB Bioinformatics Core Clemenspoort - zaal Seelos, Gent, Belgium Clemenspoort - zaal Seelos Gent Belgium 9000 [] [] [] [] [] []
  • Responsible Research & Research Integrity

    14 March 2019

    Zwijnaarde, Belgium

    Elixir node event
    Responsible Research & Research Integrity https://tess.elixir-europe.org/events/responsible-research-research-integrity After completing this course on Responsible Research & Research Integrity, the participants should have the awareness, the necessary background information, and enough practical insights to become a true responsible scientist.  Next to highly interactive theoretical lectures, different practical exercises will be built in. 2019-03-14 09:00:00 UTC 2019-03-14 00:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Center Ghent, Zwijnaarde, Belgium Bio-Accelerator Meeting Center Ghent Zwijnaarde Belgium 9052 [] [] [] [] [] []
  • Basic statistics in R, part II

    30 April - 10 May 2019

    Zwijnaarde, Belgium

    Elixir node event
    Basic statistics in R, part II https://tess.elixir-europe.org/events/basic-statistics-in-r-part-ii-f5d74d8d-5b99-4311-b6b1-ac812ec016d6 After this training you will be able to use R for basic statistical analyses. 2019-04-30 09:00:00 UTC 2019-05-10 00:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Center Ghent, Zwijnaarde, Belgium Bio-Accelerator Meeting Center Ghent Zwijnaarde Belgium 9052 [] [] [] [] [] []
  • Summer School in Advanced Light Microscopy

    20 - 23 May 2019

    Zwijnaarde, Belgium

    Elixir node event
    Summer School in Advanced Light Microscopy https://tess.elixir-europe.org/events/summer-school-in-advanced-light-microscopy 2019-05-20 09:00:00 UTC 2019-05-23 00:00:00 UTC VIB Bioinformatics Core UGent-VIB Research Building FSVM, Zwijnaarde, Belgium UGent-VIB Research Building FSVM Zwijnaarde Belgium 9052 [] [] [] [] [] []
  • Mass spectrometry data processing

    3 - 4 June 2019

    Gent, Belgium

    Elixir node event
    Mass spectrometry data processing https://tess.elixir-europe.org/events/mass-spectrometry-data-processing-510f0379-0d6e-4f42-bf52-ee6ea58066be Obtain a good understanding of the origins and properties of mass spec data Obtain an understanding of the processing of mass spec data, aimed at identifying and quantifying peptides and proteins Gain sufficient understanding of the software tools and database used, and of the issues and caveats involved, to critically analyse and assess results from mass spectrometry based proteomics experiments 2019-06-03 09:00:00 UTC 2019-06-04 00:00:00 UTC VIB Bioinformatics Core iGent, Gent, Belgium iGent Gent Belgium 9052 [] [] [] [] [] []
  • Tech Transfer Course

    26 - 30 August 2019

    Zwijnaarde, Belgium

    Elixir node event
    Tech Transfer Course https://tess.elixir-europe.org/events/tech-transfer-course In short, the technology transfer course is designed to give you an idea of: How to find out if patents exist around your new findings; What steps are necessary to commercialize your work; The VIB-approach to starting innovative companies, and How research can be turned into value for society. In the annual Technology Transfer course, the VIB Innovation & Business Team, supported by external speakers from industry, will go into detail on the practicalities of making technology transfer happen. We will discuss the basics of Intellectual Property Rights, including a hands-on patent search on your favorite topic. We will go through the term sheets and contracts that shape the framework of industrial collaborations and investments. We will have a lively case study to highlight the potentially complex relationships between scientist, TT-officer and company representative, and give an overview of the various stages of starting a new venture. If you want to participate, we ask you to submit a short abstract on a potential business idea, describing briefly the concept and potential applications. More information will follow when we receive your registration.   2019-08-26 09:00:00 UTC 2019-08-30 00:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Center Ghent, Zwijnaarde, Belgium Bio-Accelerator Meeting Center Ghent Zwijnaarde Belgium 9052 [] [] [] [] [] []
  • Analysis of single cell RNA-Seq data from 10x Genomics

    29 - 30 August 2019

    Gent, Belgium

    Elixir node event
    Analysis of single cell RNA-Seq data from 10x Genomics https://tess.elixir-europe.org/events/analysis-of-single-cell-rna-seq-data-from-10x-genomics-5360606b-8116-48e6-929f-5e3b1bd1de5b In this course we will discuss some of the advantages and pitfalls of scRNA-Seq and go through the whole scRNA-seq analysis pipeline. We will teach you how to do proper quality control and filtering on gene level and cell level, how to do create tSNE plots, how to get potential markers for a subset of cells ...  2019-08-29 09:00:00 UTC 2019-08-30 00:00:00 UTC VIB Bioinformatics Core iGent, Gent, Belgium iGent Gent Belgium 9052 [] [] [] [] [] []
  • Bioinformatics tools to predict protein properties from sequence

    10 September 2019

    Brussels, Belgium

    Elixir node event
    Bioinformatics tools to predict protein properties from sequence https://tess.elixir-europe.org/events/bioinformatics-tools-to-predict-protein-properties-from-sequence In this workshop, we address how to predict features of proteins from their sequence only, using Python scripts to access APIs of web services available online. We will introduce single-sequence based predictions of biophysical characteristics of proteins (e.g. DynaMine for backbone dynamics), methods that use multiple sequence alignments (e.g. I-TASSER), and methods that determine the difference between a protein and its mutant form (e.g. DEOGEN2). We will also show how the results of these predictions can be combined and analysed using a protein case study. 2019-09-10 09:00:00 UTC 2019-09-10 00:00:00 UTC VIB Bioinformatics Core U-Residence Brussels, Brussels, Belgium U-Residence Brussels Brussels Belgium 1050 [] [] [] [] [] []
  • FlowSOM for handling cytometry data

    15 October 2019

    Zwijnaarde, Belgium

    Elixir node event
    FlowSOM for handling cytometry data https://tess.elixir-europe.org/events/flowsom-for-handling-cytometry-data Participants will learn how to handle cytometry data in R, including quality control, visualization, clustering and comparison of samples. This will be demonstrated on an example dataset, but participants are welcome to bring some of their own fcs files to explore in addition. 2019-10-15 09:00:00 UTC 2019-10-15 00:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Center Ghent, Zwijnaarde, Belgium Bio-Accelerator Meeting Center Ghent Zwijnaarde Belgium 9052 [] [] [] [] [] []
  • Functional Plant Bioinformatics (PLAZA)

    21 - 22 October 2019

    Zwijnaarde, Belgium

    Elixir node event
    Functional Plant Bioinformatics (PLAZA) https://tess.elixir-europe.org/events/functional-plant-bioinformatics-plaza-5e977efa-32fd-43c3-a5d2-7a6091cdd564 Introduction plant comparative genomics (genes and gene families) + introduction PLAZA platform Functional characterization of plant genes (Gene families, GO, InterPro) Synteny analysis in polyploid cereals Gene set analysis for different plant -omics data sets: Functional interpretation of RNA-Seq and ChIP-Seq genes using the PLAZA Workbench Comparing gene sets between different di/polyploidy crop species 2019-10-21 09:00:00 UTC 2019-10-22 00:00:00 UTC VIB Bioinformatics Core UGent-VIB Research Building FSVM, Zwijnaarde, Belgium UGent-VIB Research Building FSVM Zwijnaarde Belgium 9052 [] [] [] [] [] []
  • Research Data Management & Data Stewardship: much more than a FAIRytale

    12 December 2019

    Brussels, Belgium

    Elixir node event
    Research Data Management & Data Stewardship: much more than a FAIRytale https://tess.elixir-europe.org/events/research-data-management-data-stewardship-much-more-than-a-fairytale Anyone interested in Research Data Management, Data Stewardship and FAIR Data is warmly invited to register for this event. Our aim is to provide you with ready-to-use knowledge to get started working on these topics within your organization.  2019-12-12 09:00:00 UTC 2019-12-12 00:00:00 UTC VIB Bioinformatics Core Hendrik Conscience Building - Brussels, Brussels, Belgium Hendrik Conscience Building - Brussels Brussels Belgium 1210 [] [] [] [] [] []
  • A tour of machine learning: classification

    13 - 14 January 2020

    Gent, Belgium

    Elixir node event
    A tour of machine learning: classification https://tess.elixir-europe.org/events/a-tour-of-machine-learning-classification-b217275f-0a31-4994-b5c6-be3d999cc9f7 Machine learning has become ubiquitous in biotechnology (as in many other fields), fueled largely by the increasing availability and amount of data. Learning algorithms can figure out how to perform important tasks by generalizing examples. Typical applications are diagnoses/prognoses, gene/protein annotation, drug design, image recognition, text mining and many others. However, building successful machine learning models requires a substantial amount of “black art” that is hard to find in textbooks. This course is an interactive Jupyter Notebook (Python) that will teach you how to build successful machine learning models. No background in machine learning is assumed, just a keen interest. 2020-01-13 09:00:00 UTC 2020-01-14 00:00:00 UTC VIB Bioinformatics Core iGent, Gent, Belgium iGent Gent Belgium 9052 [] [] [] [] [] []
  • Hands-On introduction to NGS variant analysis

    20 - 21 January 2020

    Gent, Belgium

    Elixir node event
    Hands-On introduction to NGS variant analysis https://tess.elixir-europe.org/events/hands-on-introduction-to-ngs-variant-analysis-9abd671c-4d42-4124-b084-9f2453cc9799 Using a full publicly available chromosome read-set from one of the 1000 genome samples: ​Perform a complete analysis workflow including QC, read mapping, read coverage analysis, and variant calling against the human reference genome. Use GenePattern and open source software to evaluate each step of a classical NGS variant workflow and feel the complexity of the task. Quickly compare the obtained results with gold standard public data The skills acquired during this session should allow participants understand what variant calling implies. Participants with experience in command line can do the workflow using command line tools. 2020-01-20 09:00:00 UTC 2020-01-21 00:00:00 UTC VIB Bioinformatics Core iGent, Gent, Belgium iGent Gent Belgium 9052 [] [] [] [] [] []
  • Basic statistics in R part II - postponed

    19 - 27 March 2020

    Zwijnaarde, Belgium

    Elixir node event
    Basic statistics in R part II - postponed https://tess.elixir-europe.org/events/basic-statistics-in-r-part-ii-8038299b-a523-44e9-9283-3bf2dc045af1 After this training you will be able to use R for basic statistical analyses. 2020-03-19 09:00:00 UTC 2020-03-27 00:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Center Ghent, Zwijnaarde, Belgium Bio-Accelerator Meeting Center Ghent Zwijnaarde Belgium 9052 [] [] [] [] [] []
  • Basic statistics in R, Leuven - online

    3 April - 5 May 2020

    Zwijnaarde, Belgium

    Elixir node event
    Basic statistics in R, Leuven - online https://tess.elixir-europe.org/events/basic-statistics-in-r-leuven-a57e26ce-dedd-44f4-8b37-000ffd980f50 Get an idea of what R and Rstudio is Use R to handle data: creating, reading, reformatting and writing data Use R to create graphics Use basic statistical techniques in R : normality tests, t-tests, wilcoxon tests, chi square tests, correlations, survival analysis... Write and use R scripts 2020-04-03 09:00:00 UTC 2020-05-05 00:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Center Ghent, Zwijnaarde, Belgium Bio-Accelerator Meeting Center Ghent Zwijnaarde Belgium 9052 [] [] [] [] [] []
  • Basic statistics in R, Leuven - online

    28 May - 18 June 2020

    Zwijnaarde, Belgium

    Elixir node event
    Basic statistics in R, Leuven - online https://tess.elixir-europe.org/events/basic-statistics-in-r-leuven-91de71fa-c67c-49e8-b2b6-fcce11a5f551 Get an idea of what R and Rstudio is Use R to handle data: creating, reading, reformatting and writing data Use R to create graphics Use basic statistical techniques in R : normality tests, t-tests, wilcoxon tests, chi square tests, correlations, survival analysis... Write and use R scripts 2020-05-28 09:00:00 UTC 2020-06-18 00:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Center Ghent, Zwijnaarde, Belgium Bio-Accelerator Meeting Center Ghent Zwijnaarde Belgium 9052 [] [] [] [] [] []

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