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13 events found

Target audience: PhD students 

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City: Bogota  or Bethesda  or Chicago  or Zurich  or Istanbul  or Bruxelles  or Brno 

  • ELIXIR Workshop Genomics

    7 - 8 November 2016

    Bruxelles, Belgium

    Elixir node event
    ELIXIR Workshop Genomics https://tess.elixir-europe.org/events/elixir-workshop-genomics Goal The fast generation of large amounts of data is fundamentally changing the way how research is done today. Many domains of research are challenged with managing, analyzing and sharing genomics data. This is not just a challenge, it is an oppurtunity to implement this workshop for researchers to learn basic handling of genomics concepts, skills and tools. This workshop is aimed at researchers in the life sciences at all career stage and is designed for learners with little to no prior knowledge of Linux and command line tools or biological networks in Cytoscape. A basic knowledge of programming in R is recommended. ​ Workshop Topics The main ambition or this workshop is that researchers get more familiar with genomics data and handle it in a more efficient way. The following topics will be covered during the workshop.   DAY 1 Introduction to Linux and the command line The first session will introduce you to the use of Linux and the command line for managing and analyzing genomics data.   DAY 2​ Data manipulation in R This session gives an introduction to the use of the R packages plyr and ggplot2 for data manipulation and subsequent graphing. Initiation Cytoscape In this tutorial, you will be introduced to the basics of Cytoscape (how to make a network, change the visualisation parameters such as the layout, ...), and to more advanced functionalities such as data integration and data analysis using Cytoscape plugins. 2016-11-07 09:00:00 UTC 2016-11-08 17:00:00 UTC ELIXIR Belgium Belgian Science Policy (BELSPO), 231, Avenue Louise, Bruxelles, Belgium Belgian Science Policy (BELSPO), 231, Avenue Louise Bruxelles Belgium Data visualisation Molecular interactions, pathways and networks Bioinformatics VIB christof.debo@vib.be ELIXIR-BE PhD studentsPost Docs [] [] Cytoscape R-programming Linux
  • Bioinformatics of long read sequencing

    8 - 9 November 2018

    Zurich, Switzerland

    Elixir node event
    Bioinformatics of long read sequencing https://tess.elixir-europe.org/events/bioinformatics-of-long-read-sequencing Please note that this course is over subscribed. 2018-11-08 09:00:00 UTC 2018-11-09 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • SPHN Data Privacy and IT Security Training

    20 November 2018

    Zurich, Switzerland

    Elixir node event
    SPHN Data Privacy and IT Security Training https://tess.elixir-europe.org/events/sphn-data-privacy-and-it-security-training Overview Within the Swiss Personalized Health Network (SPHN) and related national initiatives researchers use patient data (i.e., confidential human data) in their research projects. 2018-11-20 09:00:00 UTC 2018-11-20 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • High Performance Computing for genomic applications

    26 - 27 November 2018

    Zurich, Switzerland

    Elixir node event
    High Performance Computing for genomic applications https://tess.elixir-europe.org/events/high-performance-computing-for-genomic-applications-01f41c8d-a78f-4354-b37c-5a1ec697159b Overview The course "High Performance Computing for genomic applications" is organized for the D-BIOL researchers (including PhD students) by Scientific IT Services on 26-27 November 2018. 2018-11-26 09:00:00 UTC 2018-11-27 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to statistics

    22 - 25 January 2019

    Zurich, Switzerland

    Elixir node event
    Introduction to statistics https://tess.elixir-europe.org/events/introduction-to-statistics-ffd2c538-293c-4e8d-87c5-f3e6801a564e Please note that this course is full. Overview This course is designed to provide researchers in biomedical sciences with experience in the application of basic statistical analysis techniques to a variety of biological problems. 2019-01-22 09:00:00 UTC 2019-01-25 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • R-packaging

    5 February 2019

    Zurich, Switzerland

    Elixir node event
    R-packaging https://tess.elixir-europe.org/events/r-packaging-7d99e72f-ed13-45f7-807c-8903907185c0 This course is full. Overview In this course, R programmers will learn how to create R packages, the best way to make R scripts reusable. Participants will learn how to identify and create clear, clean and usable packages in R. 2019-02-05 09:00:00 UTC 2019-02-05 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Workshop on Computational Biology at biology'19

    6 February 2019

    Zurich, Switzerland

    Elixir node event
    Workshop on Computational Biology at biology'19 https://tess.elixir-europe.org/events/workshop-on-computational-biology-at-biology-19 Overview SIB is co-organizing a workshop on computational biology on 6 Feb 2019 in Zurich, as a satellite event to Biology 2019, the annual Swiss conference on ecology, evolution, systematics and conservation. 2019-02-06 09:00:00 UTC 2019-02-06 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Introduction to R Shiny

    6 May 2019

    Zurich, Switzerland

    Elixir node event
    Introduction to R Shiny https://tess.elixir-europe.org/events/introduction-to-r-shiny This course is over subscribed. You can still add your name to the waiting list by applying using the button at the bottom of this page. You will only be contacted if a place becomes available. 2019-05-06 09:00:00 UTC 2019-05-06 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • ELIXIR-SIB Data Carpentry with R - Genomics curriculum

    1 - 2 July 2019

    Zurich, Switzerland

    Elixir node event
    ELIXIR-SIB Data Carpentry with R - Genomics curriculum https://tess.elixir-europe.org/events/elixir-sib-data-carpentry-with-r We are sorry but this course is oversubscribed, with a long waiting list. Keep an eye in our distribution list (sign in here) for the announcements of future courses. 2019-07-01 09:00:00 UTC 2019-07-02 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Good practice in high-throughput experiments

    30 September - 1 October 2019

    Zurich, Switzerland

    Elixir node event
    Good practice in high-throughput experiments https://tess.elixir-europe.org/events/good-practice-in-high-throughput-experiments Overview This course offers an overview of good practice in high-throughput experiments (e.g. next-generation sequencing or compound screening). Particularly we focus on pitfalls in the design of projects (e.g. 2019-09-30 09:00:00 UTC 2019-10-01 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • Advanced R Shiny

    5 December 2019

    Zurich, Switzerland

    Elixir node event
    Advanced R Shiny https://tess.elixir-europe.org/events/advanced-r-shiny We are sorry but this course is oversubscribed. You can still apply but your name will be place on the waiting list and you will only be contacted in the case a cancellation happens. 2019-12-05 09:00:00 UTC 2019-12-05 00:00:00 UTC SIB, Zurich, Switzerland SIB Zurich Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • 1st Hands-on Computational Enzyme Design Course

    2 - 5 February 2020

    Brno, Czechia

    1st Hands-on Computational Enzyme Design Course https://tess.elixir-europe.org/events/1st-hands-on-computational-enzyme-design-course-89570791-2caf-47ee-8553-85181cee128a Do you need to engineer your protein of interest? Do you wish to employ user-friendly one-stop-shop software tools for the design of mutations and libraries, but do not want to spend time on tedious installations? This three-day interactive course will provide the essential theory and hands-on experience on a number of web-based tools suitable for enzyme mining and engineering activity, specificity, enantioselectivity, stability, and solubility. You will have the chance to discuss with the developers of these tools the optimal way to set-up calculations and adequately interpret the results. Special time will be devoted to the proteins of interest of the individual participants. At the end of this three-day course, you will be able to independently design proteins for your academic research or commercial application. Covered software: AutoDock, Blast, Caver, Caver Analyst, CaverDock, CaverWeb, CalFitter, EnzymeMiner, FireProt, HotSpot Wizard, Rosetta, Solubis, SoluProt, Yasara, and VMD. Our web tools integrate individual software, and altogether, you will get automated access to more than 50 computational methods and 15 databases. 2020-02-02 15:00:00 UTC 2020-02-05 21:00:00 UTC FNUSA, ELIXIR CZ Kamenice 5, 5, Kamenice, Brno, Czechia Kamenice 5, 5, Kamenice Brno Brno-město Czechia Structural biology Molecular modelling Enzymes [] https://loschmidt.chemi.muni.cz/academy/#contact [] postdocsPhD students 30 workshops_and_courses first_come_first_served []
  • 1st Hands-on Computational Enzyme Design Course

    2 - 5 February 2020

    Brno, Czech Republic

    1st Hands-on Computational Enzyme Design Course https://tess.elixir-europe.org/events/1st-hands-on-computational-enzyme-design-course The three-day interactive course will provide the essential theory and hands-on experience on a number of web-based tools suitable for enzyme mining and engineering activity, specificity, enantioselectivity, stability, and solubility. Participants will have the chance to discuss the optimal way to set-up calculations and adequately interpret the results with the developers of these tools. Special time will be devoted to the proteins of interest of the individual participants. At the end of this three-day course, you will be able to independently design proteins for your academic research or commercial application. 2020-02-02 15:00:00 UTC 2020-02-05 20:00:00 UTC Loschmidt Laboratories, Masaryk University University Campus Bohunice, Masaryk University, Brno, Czech Republic, Brno, Czech Republic University Campus Bohunice, Masaryk University, Brno, Czech Republic Brno Brno Czech Republic [] jitkasedlackova@mail.muni.cz [] AcademiaIndustryPhD studentsUndergraduate students workshops_and_courses registration_of_interest bioinformaticsprotein engineeringenzyme miningsoftware tools
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