Register event
  • Installing and configuring Linux Ubuntu for bioinformatics

    7 April 2016

    Canberra, Australia

    Installing and configuring Linux Ubuntu for bioinformatics https://tess.elixir-europe.org/events/installing-and-configuring-linux-ubuntu-for-bioinformatics CBBU, COMBINE, and SCU are organizing a series of introductory bioinformatics and statistics workshops. The workshops are primarily aimed at students, postdocs and early-mid career researchers, but are open to everybody from our College. 2016-04-07 09:00:00 UTC 2016-04-07 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Bioinformatics [] [] [] workshops_and_courses [] ABRBioinformatics
  • Software Carpentry Introduction to Programming with R and Use of Unix Shell and Git, plus Data Carpentry Processing and Visualization of Genomic Datasets

    11 - 13 April 2016

    Canberra, Australia

    Software Carpentry Introduction to Programming with R and Use of Unix Shell and Git, plus Data Carpentry Processing and Visualization of Genomic Datasets https://tess.elixir-europe.org/events/software-carpentry-introduction-to-programming-with-r-and-use-of-unix-shell-and-git-plus-data-carpentry-processing-and-visualization-of-genomic-datasets Workshops in bioinformatics and statistics CBBU, COMBINE, and SCU are organizing a series of introductory bioinformatics and statistics workshops. The workshops are primarily aimed at students, postdocs and early-mid career researchers, but are open to everybody from our College. 2016-04-11 09:00:00 UTC 2016-04-13 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Bioinformatics Data visualisation Data management [] [] [] workshops_and_courses [] ABRBioinformaticsSoftwareCarpentry
  • Experimental design and statistics

    17 May 2016

    Canberra, Australia

    Experimental design and statistics https://tess.elixir-europe.org/events/experimental-design-and-statistics This workshop will be run in the form of five 2-hour long sessions. There will be two sessions per week starting from mid-May. Preliminary dates are May 17th, 20th, 24th, 27th, and June 3rd. The times and venues are: Tue May 17 - 1 - 3pm, Slatyer Seminar Room Fri May 20 - 10am - 12pm, Gould Seminar Room Tue May 24 - 1 - 3pm, RN Robertson boardroom Fri May 27 - 10am - 12pm, Slatyer Seminar Room Fri Jun 3 - 10am - 12pm in STB-S1 at The Sciences Teaching Bldg. 2016-05-17 09:00:00 UTC 2016-05-17 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Data architecture, analysis and design Bioinformatics [] [] [] workshops_and_courses [] ABRBioinformatics
  • Software carpentry introduction to programming with Python and use of Unix Shell and Git

    30 May - 1 June 2016

    Canberra, Australia

    Software carpentry introduction to programming with Python and use of Unix Shell and Git https://tess.elixir-europe.org/events/software-carpentry-introduction-to-programming-with-python-and-use-of-unix-shell-and-git Workshops in bioinformatics and statistics CBBU, COMBINE, and SCU are organizing a series of introductory bioinformatics and statistics workshops. The workshops are primarily aimed at students, postdocs and early-mid career researchers, but are open to everybody from our College. This workshop is for novices and doesn't require any prior knowledge in Python, Git or Shell. The cost is $90 AUD to cover lunches and teas. It possible to pay with the GLC or bank transfer. Anybody interested please register no later than 22 May. 2016-05-30 09:00:00 UTC 2016-06-01 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Bioinformatics Data architecture, analysis and design [] [] [] workshops_and_courses [] ABRBioinformaticsSoftwareCarpentry
  • Detecting Mutations with Short-Read Sequencing

    15 July 2016

    Canberra, Australia

    Detecting Mutations with Short-Read Sequencing https://tess.elixir-europe.org/events/detecting-mutations-with-short-read-sequencing Reed A. Cartwright, Arizona State University Studying the process of de novo mutation from deep-sequencing of related samples is a difficult task. Because de novos are rare, artifacts generated by experimental and biological error tend to be more common than true positives. While de novos can be identified through validation, this is a slow process. In order to estimate mutation rates on large datasets in an automated way, we need to develop new probabilistic models that can handle sources of false positives. In this talk I will be discussing new computational methods to detect de novo mutations and their application to three different systems: human trios, ciliate mutation accumulation experiments, and yellow box eucalyptus. TIC Techniques In Computational Genomics A community of researchers engaged in, or dependent on, computational analysis of genomic data Weekly seminars by volunteers Drop-in sessions/round-table discussions convened by the Genome Discovery Unit (GDU) Venue alternates between JCSMR and RSB, ANU. To be added to TIC email list please contact marcin.adamski@anu.edu.au 2016-07-15 09:00:00 UTC 2016-07-15 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Computational biology Bioinformatics [] [] [] meetings_and_conferences [] BioinformaticsABR
  • Introduction to R and RStudio

    31 October 2016

    Canberra, Australia

    Introduction to R and RStudio https://tess.elixir-europe.org/events/introduction-to-r-and-rstudio Introduction to R and RStudio co-organized with Teresa Neeman from Australian National University Statistical Consulting Unit. The workshop will be over 2 half-days 31/10 and 1/11 9:30am - 1:30pm, and will cover basic concepts in R, including: introduction to R and RStudio, importing and graphing data, basic data processing, and statistics, good coding practice. The short course will help you to be more confident using R and will prepare you for understanding statistical modelling in R. This workshop is for R and RStudio novices. No previous experience in R or RStudio is expected. We especially invite mid-year honours students. Please note that this workshop was already advertised to honours students by Giel Van Dooren. To sign up please email no later than October 7th. The workshops are offered at no cost. 2016-10-31 09:00:00 UTC 2016-10-31 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Data visualisation Data management [] [] [] workshops_and_courses [] ABRBioinformatics
  • Data Processing in R for beginners

    8 November 2016

    Canberra, Australia

    Data Processing in R for beginners https://tess.elixir-europe.org/events/data-processing-in-r-for-beginners Data Processing in R for beginners co-organized with Janet Gardner from EEG. This will be a 6 hours workshop on 8/11 9:30 - 12:30 - lunch break - 1:00pm - 4:00pm and will be covering: Brief introduction to R and RStudio. Data types in R, and type conversions. Loading and saving tab and coma delimited files. Data exploration: basic statistic (mean, std. deviation and so on), basic plots (dotplots and histograms). Data sub-setting and filtering. Adding new columns with calculated values. Find-and-replace for values in a column. Detecting and handling errors an missing values in the data. Designing an appropriate structure for a spreadsheet. Joining datasets. Programming - creating functions in R. To sign up please email marcin.adamski@anu.edu.au no later than October 7th. The workshops are offered at no cost. 2016-11-08 09:00:00 UTC 2016-11-08 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Bioinformatics Data visualisation Data management [] [] [] workshops_and_courses [] ABRBioinformatics
  • Data Processing in R for advanced users

    15 November 2016

    Canberra, Australia

    Data Processing in R for advanced users https://tess.elixir-europe.org/events/data-processing-in-r-for-advanced-users Data Processing in R for advanced users co- organized with Janet Gardner from EEG. This will be a 6 hours workshop on 15/11 9:30 - 12:30 - lunch break - 1:00pm - 4:00pm covering the same subjects as workshop #2 but will be much more focused on writing code (programming in R) and practical exercises and will skip the basics. To sign up please email marcin.adamski@anu.edu.au no later than October 7th. The workshops are offered at no cost. 2016-11-15 09:00:00 UTC 2016-11-15 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Bioinformatics Data visualisation Data management [] [] [] workshops_and_courses [] ABRBioinformatics
  • Electronic Lab Notebook Introduction - Ghent

    18 April 2017

    Ghent, Belgium

    Elixir node event
    Electronic Lab Notebook Introduction - Ghent https://tess.elixir-europe.org/events/electronic-lab-notebook-introduction-ghent-638a1f0b-2d27-4f09-b291-72bee6d64baa 2017-04-18 10:00:00 UTC 2017-04-18 12:00:00 UTC VIB Bioinformatics Core PC room V114 1st floor front building VIB-UGent Research Building, Ghent, Belgium PC room V114 1st floor front building VIB-UGent Research Building Ghent Belgium 9052 [] [] [] [] [] []
  • Initiation GIMP and Inkscape Ghent

    2 May 2017

    Ghent, Belgium

    Elixir node event
    Initiation GIMP and Inkscape Ghent https://tess.elixir-europe.org/events/initiation-gimp-and-inkscape-ghent 2017-05-02 09:00:00 UTC 2017-05-02 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Ghent, Belgium Bio-Accelerator Ghent Belgium 9052 [] [] [] [] [] []
  • Initiation GIMP and Inkscape - Ghent

    9 May 2017

    Ghent, Belgium

    Elixir node event
    Initiation GIMP and Inkscape - Ghent https://tess.elixir-europe.org/events/initiation-gimp-and-inkscape-ghent-bd18f6fb-c469-418d-8b9e-bd73e73ce890 2017-05-09 09:00:00 UTC 2017-05-09 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Centre, Ghent, Belgium Bio-Accelerator Meeting Centre Ghent Belgium 9052 [] [] [] [] [] []
  • Functional Plant Bioinformatics - PLAZA

    14 - 15 September 2017

    Ghent, Belgium

    Elixir node event
    Functional Plant Bioinformatics - PLAZA https://tess.elixir-europe.org/events/functional-plant-bioinformatics-plaza 2017-09-14 10:00:00 UTC 2017-09-15 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Center, Ghent, Belgium Bio-Accelerator Meeting Center Ghent Belgium 9052 [] [] [] [] [] []
  • Analysis of metabolome data

    15 January 2018

    Ghent, Belgium

    Elixir node event
    Analysis of metabolome data https://tess.elixir-europe.org/events/analysis-of-metabolome-data This training is intended for people who have a basic knowledge of R. Participants who have never worked with R should first follow the course Basic statistics in R.  The morning session will handle differences affecting data handling between GC-MS and LC-MS.  2018-01-15 09:30:00 UTC 2018-01-15 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Ghent, Belgium Bio-Accelerator Ghent Belgium 9052 [] [] [] [] [] []
  • Introduction to Biopython

    29 - 30 March 2018

    Ghent, Belgium

    Elixir node event
    Introduction to Biopython https://tess.elixir-europe.org/events/introduction-to-biopython ​​Understand what Biopython is and what it can do. Learn how to get Biopython running. Learn how to retrieve data records from NCBI. Learn how to read and write sequence files. Learn how to run BLAST from Python and read the results. Learn how to read and write phylogenetic tree files. Learn how to read and write 3D structure files. Learn how to use the Biopython documentation, examples, and where to find help. Understand what alternatives to Biopython exist and what they can do.   Biopython is the best-known Python library to process biological data. This training is aimed to empower you to use Biopython to make your research more efficient. The first day of the training is to give an overview of Biopython. You are going to start with your first steps in Biopython on the command line. Afterwards, you will take a tour of the most important components: sequences, NCBI queries, BLAST, trees, and 3D structures. You will try each of these modules on practical examples. Please don't hesitate to ask questions about Python basics or particular data formats (e.g. XML or NGS data). The second day of the training is to broaden your perspective: What other features does the library have? How can you use the documentation effectively? What is Biopython not capable of?  What can I do to visualize my data? Are there alternatives? If you have your own data that you would like to work on with Biopython in more detail, there is room for that. For me, the most important thing is to identify concrete Python modules and functions that help you to get your research done. Participants are encouraged to submit a description of their research topic and/or the questions they would like to answer with Biopython. Additionally, participants can bring their own data that they would like to process in Python to the training. 2018-03-29 09:30:00 UTC 2018-03-30 17:00:00 UTC VIB Bioinformatics Core BioAccelerator, Ghent, Belgium BioAccelerator Ghent Belgium 9052 [] [] [] [] [] []
  • My code changed and using Git I know where and when

    24 April 2018

    Ghent, Belgium

    Elixir node event
    My code changed and using Git I know where and when https://tess.elixir-europe.org/events/my-code-changed-and-using-git-i-know-where-and-when 2018-04-24 15:00:00 UTC 2018-04-24 18:00:00 UTC VIB Bioinformatics Core Ghent VIB-UGent Research Building LEAF room (E124) right side of the building, first floor, Ghent, Belgium Ghent VIB-UGent Research Building LEAF room (E124) right side of the building, first floor Ghent Belgium 9052 [] [] [] [] [] []
  • A tour of machine learning - classification

    12 June 2018

    Ghent, Belgium

    Elixir node event
    A tour of machine learning - classification https://tess.elixir-europe.org/events/a-tour-of-machine-learning-classification ok Python Numpy/Pandas 2018-06-12 09:30:00 UTC 2018-06-12 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Ghent, Belgium Bio-Accelerator Ghent Belgium 9052 [] [] [] [] [] []
  • Linux for bioinformatics

    5 - 12 November 2018

    Ghent, Belgium

    Elixir node event
    Linux for bioinformatics https://tess.elixir-europe.org/events/linux-for-bioinformatics b'\nAfter this training you will\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\n\r\n \r\nfeel comfortable using Linux \r\n\r\n \r\nknow how software works on Linux and how to install and use it  \r\n\r\n \r\nuse bash to execute\r\n commands in Linux and know your way around the file system\r\n\r\n \r\nhave an overview of Linux tools that are extremely useful for bioinformatics\r\n\r\n\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n \r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\nSummary\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\nThis training is intended for all Linux novices who\r\nwant to learn the basics of Linux without getting too much technical details.\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\nThis hands-on training will show you how to\r\neffectively use Linux Ubuntu. Bioinformatics depends heavily on Linux-based computers and software. A lot of good scientific\r\nsoftware is written specifically for Linux. Additionally, Linux has most popular programming languages (e.g.Python, Perl, C) already installed and\r\nready to use! This\r\ntraining will teach you all you need to know to swiftly start using Linux, be it on the server of your department, or on your own computer (even if you\'re already running\r\nWindows or MacOS).\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n \r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\nTentative schedule​\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\nPrior to the training session, you will receive a poll to ask you your personal goals by following this training sesion. Depending on the outcome, the schedule will be adjusted.\r\n \r\n\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\nDay 1\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\n\r\n \r\nUNIX fundamentals and other Linux distributions\r\n\r\n \r\nInstall\r\n Linux distributions: test it harmlessly by running in live mode\r\n\r\n \r\nDifferent methods of\r\n installing software and where to get it\r\n\r\n \r\nThe UNIX file system \r\n\r\n \r\nLUNCH\r\n\r\n \r\nUsers on Linux and  access rights to view, create and execute\r\n\r\n \r\nGentle introduction\r\n to the command line in linux\r\n\r\n \r\n\n\r\n \r\nbasics\r\n of the command line\r\n\r\n \r\nbest tips enhancing\r\n your command line experience\r\n\r\n \r\nreading and writing\r\n contents in the command line\r\n\r\n \n\r\n\r\n\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\nDay 2\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\n\r\n \r\nBioinformatics in Linux\r\n\r\n \r\n\n\r\n \r\ninstalling useful\r\n bioinformatics and programming tools\r\n\r\n \r\nanalysing text\r\n output from bioinformatics tools\r\n\r\n \r\npassing outputs from\r\n and to different tools \r\n\r\n \r\nscripting\r\n in Linux\r\n\r\n \n\r\n\r\n \r\nLUNCH\r\n\r\n \r\nLinux\r\n in a network\r\n\r\n\r\nLinux playground: Open questions. Play around with your Linux to make it fit your (bioinformatics)\r\n needs. ​​​​​​​​​​​​​​​​​​\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n\r\n​​\n\r\n​​​​​\n \r\n\r\n\n \r\n\r\n\n' 2018-11-05 09:30:00 UTC 2018-11-12 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Ghent, Belgium Bio-Accelerator Ghent Belgium 9052 [] [] [] [] [] []
  • Electronic Lab Notebook Introduction - Ghent

    14 November 2018

    Ghent, Belgium

    Elixir node event
    Electronic Lab Notebook Introduction - Ghent https://tess.elixir-europe.org/events/electronic-lab-notebook-introduction-ghent 2018-11-14 10:00:00 UTC 2018-11-14 12:00:00 UTC VIB Bioinformatics Core PC room V114 - 1st floor front building VIB-UGent Research Building, Ghent, Belgium PC room V114 - 1st floor front building VIB-UGent Research Building Ghent Belgium 9052 [] [] [] [] [] []
  • Basic statistics in R, Ghent

    15 - 29 January 2019

    Ghent, Belgium

    Elixir node event
    Basic statistics in R, Ghent https://tess.elixir-europe.org/events/basic-statistics-in-r-ghent b'\nGet an idea of what R and Rstudio is\r\nUse R to handle data: creating, reading, reformatting and writing data\r\nUse R to create graphics\r\nUse basic statistical techniques in R : normality tests, t-tests, wilcoxon tests, chi square tests, correlations, survival analysis...\r\nWrite and use R scripts\n\r\n\n \nThis training gives an introduction to the use of the statistical software language R. R is a language for data analysis and graphics. This introduction to R is aimed at beginners. The training covers data handling, graphics, and basic statistical techniques. \r\nR is for free and for more information you can visit the site the CRAN web site.This training is an introduction to the use of R and RStudio and stops at very basic analyses (t-tests and non-parametric equivalents). A full overview of statistical analyses in R including regression, ANOVA will be given in the follow-up training Basic statistics in R, part II.\n\r\n \r\nRequirements\r\nThe training is intended for people who have no experience with R. However, understanding of basic statistical concepts is required, such as data types, normal distribution, descriptive statistics, tests for comparing groups... If you don\'t have sufficient statistical background you are strongly encouraged to attend the Basic statistics theorytraining. \r\nThis training is recommended for people with no experience in R who are planning to follow a training that requires some R background, like the mass spectrometry , the single cell RNA-Seq and the bulk RNA-Seq training....\n\r\n\n' 2019-01-15 09:30:00 UTC 2019-01-29 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Ghent, Belgium Bio-Accelerator Ghent Belgium 9052 [] [] [] [] [] []
  • Analysis of single cell RNA-Seq data from 10x Genomics

    4 - 5 February 2019

    Ghent, Belgium

    Elixir node event
    Analysis of single cell RNA-Seq data from 10x Genomics https://tess.elixir-europe.org/events/analysis-of-single-cell-rna-seq-data-from-10x-genomics 2019-02-04 09:30:00 UTC 2019-02-05 17:00:00 UTC VIB Bioinformatics Core iGent Tower, Ghent, Belgium iGent Tower Ghent Belgium 9052 [] [] [] [] [] []
  • Basic statistics in R

    11 - 18 March 2019

    Ghent, Belgium

    Elixir node event
    Basic statistics in R https://tess.elixir-europe.org/events/basic-statistics-in-r-63029133-bc3b-45a9-a06f-15a53b2c8970 Get an idea of what R and Rstudio is Use R to handle data: creating, reading, reformatting and writing data Use R to create graphics Use basic statistical techniques in R : normality tests, t-tests, wilcoxon tests, chi square tests, correlations, survival analysis... Write and use R scripts 2019-03-11 09:00:00 UTC 2019-03-18 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []
  • Introduction to Reproducible Genomics: Data Carpentry

    13 - 14 May 2019

    Ghent, Belgium

    Elixir node event
    Introduction to Reproducible Genomics: Data Carpentry https://tess.elixir-europe.org/events/introduction-to-reproducible-genomics-data-carpentry 2019-05-13 09:00:00 UTC 2019-05-14 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []
  • Best practices in Research Software

    15 May 2019

    Ghent, Belgium

    Elixir node event
    Best practices in Research Software https://tess.elixir-europe.org/events/best-practices-in-research-software Four simple recommendations to encourage best practices in open research software is a publication that addresses this issue by providing a simple, yet robust framework of recommendations that encourage the adoption of existing best practices in research software development. These recommendations are designed around Open Science values, and provide practical suggestions that contribute to making research software and its source code more discoverable, reusable and transparent. These recommendations recognise that not everyone can or want to make their software open from day one, but we encourage you to learn from the recommendations and adapt them to your needs. For example, you can have a private repository, you can and should still have a license, make contributions clear, and have a registry of your software. Participants must bring a laptop with a Mac, Linux, or Windows operating system (not a tablet, Chromebook, etc.) that they have administrative privileges on. They should have a few specific software packages installed (listed below) Recommendations to make your research software open Reference 2019-05-15 09:00:00 UTC 2019-05-15 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []
  • Gentle hands-on introduction to Python programming

    27 May - 3 June 2019

    Ghent, Belgium

    Elixir node event
    Gentle hands-on introduction to Python programming https://tess.elixir-europe.org/events/gentle-hands-on-introduction-to-python-programming-e767c4ec-faae-40ba-b12e-8a59d3e6dff5 Learning the basics of Python programming: different variables, reading files, writing files, conditional statements Being able to write a basic Python script from scratch 2019-05-27 09:00:00 UTC 2019-06-03 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []
  • Initiation to Linux command line

    25 September 2019

    Ghent, Belgium

    Elixir node event
    Initiation to Linux command line https://tess.elixir-europe.org/events/initiation-to-linux-command-line After this training you will: feel comfortable using Linux command line use bash to execute commands in Linux and know your way around the file system 2019-09-25 09:00:00 UTC 2019-09-25 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []
  • Galaxy Training: Using Galaxy for RNA-seq

    8 October 2019

    Ghent, Belgium

    Elixir node event
    Galaxy Training: Using Galaxy for RNA-seq https://tess.elixir-europe.org/events/galaxy-training-using-galaxy-for-rna-seq This practical aims to familiarize you with the Galaxy user interface & execute a complete analysis of RNA-seq data. It will teach you how to perform basic tasks such as importing data, running tools, working with histories, creating workflows, and sharing your work. In this tutorial we will introduce you to bare basics of Galaxy: Getting data from external databases such as UCSC Performing simple data manipulation Understanding Galaxy’s History system Creating and running a workflow The RNA-seq data analysis part comprises: Filtering and quality control of reads Mapping of reads to reference genomes Examples of downstream data-analysis possibilities (variant calling, differential expression, etc.)  This workshop is organised by ELIXIR Belgium. 2019-10-08 09:00:00 UTC 2019-10-08 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []
  • Analyzing flow cytometry data using FlowJo

    4 November 2019

    Ghent, Belgium

    Elixir node event
    Analyzing flow cytometry data using FlowJo https://tess.elixir-europe.org/events/analyzing-flow-cytometry-data-using-flowjo-3ed1b102-2a7c-4a0b-a228-37ee8d0a4a70 Learn researchers how to analyze flow cytometry data in an efficient way using FlowJo v10,the world’s nr.1 analysis software tool for flow cytometry data. This training will make you familiar with all the basic and advanced features of FlowJo v10. In the end you will be able to analyze and visualize your flow data and learn how to get the statistics out of it 2019-11-04 09:00:00 UTC 2019-11-04 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []
  • Introduction to Git & GitHub

    7 November 2019

    Ghent, Belgium

    Elixir node event
    Introduction to Git & GitHub https://tess.elixir-europe.org/events/introduction-to-git-github Get you started with Git from zero (note that if you already use Git, this workshop will be too basic for you). We'll look into git on a command-line level & GitHub online version. Introduction, set-up & configurations Working locally: Create a repository, clone, edit, staging commits, commit & push Working with your history, logs and diffs (including undo changes) Working in a project: Forking, branching, pull requests, fetch, merge, pull & push In the most likely case, we have time left: Resolving common problems Collaborating tactics Gitignore files 2019-11-07 09:00:00 UTC 2019-11-07 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []
  • Basic statistics in R - Ghent

    28 January - 11 February 2020

    Ghent, Belgium

    Elixir node event
    Basic statistics in R - Ghent https://tess.elixir-europe.org/events/basic-statistics-in-r-ghent-52e1df37-86bb-4f0c-bc96-b9854ea0396e Get an idea of what R and Rstudio is Use R to handle data: creating, reading, reformatting and writing data Use R to create graphics Use basic statistical techniques in R : normality tests, t-tests, wilcoxon tests, chi square tests, correlations, survival analysis... Write and use R scripts 2020-01-28 09:00:00 UTC 2020-02-11 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []
  • Initiation to Linux command line

    6 February 2020

    Ghent, Belgium

    Elixir node event
    Initiation to Linux command line https://tess.elixir-europe.org/events/initiation-to-linux-command-line-a6224e08-531b-4cab-a675-5157cec55e4e After this training you will: feel comfortable using Linux command line use bash to execute commands in Linux and know your way around the file system 2020-02-06 09:00:00 UTC 2020-02-06 00:00:00 UTC VIB Bioinformatics Core Clemenspoort Gent, Ghent, Belgium Clemenspoort Gent Ghent Belgium 9000 [] [] [] [] [] []

Note, this map only displays events that have geolocation information in TeSS.
For the complete list of events in TeSS, click the grid tab.