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6 events found

Scientific topics: Sequencing  or Computer science  or Machine learning 

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City: Bogota  or Athens  or Brisbane  or Barcelona  or Lisbon  or Bern  or Parkville 

  • Differential Gene Expression Analysis with R (microarray and NGS)

    25 May 2016

    Brisbane, Australia

    Differential Gene Expression Analysis with R (microarray and NGS) https://tess.elixir-europe.org/events/differential-gene-expression-analysis-with-r-microarray-and-ngs This hands-on workshop will introduce users of the R software environment to the specific skills and applications used in the analysis of microarray and next-generation sequencing (NGS) data. Practical exercises will include quality control and normalisation of data for differential gene expression, and linking genomic information to external public datasets. Recommended participants Biologists and bioinformaticians wishing to use R for RNA expression analysis. Prior expertise with R and the command line interface is required, to a level equivalent of that provided by the QFAB workshop “Introduction to R”. What will I learn? During this course you will learn about: Pre-processing and quality control of microarray and RNA-Seq data The use of R packages for the identification of differentially-expressed genes from expression data Systems biology interpretation of gene lists using pathway analysis Integration of expression and genome data with Ensembl databases After this course you should be able to: Import Affymetrix CEL files to R as data objects Carry out standard QC tests on microarray and RNA-Seq datasets Use the limma-voom R package to produce lists of differentially expressed genes between pairs of samples Identify over-represented gene ontology categories in gene lists using the GOStats package 2016-05-25 09:00:00 UTC 2016-05-25 00:00:00 UTC University of Queensland, Brisbane, Australia University of Queensland Brisbane Australia Sequencing Gene expression Data architecture, analysis and design [] [] [] workshops_and_courses [] ABRQFABR
  • Software Carpentry with R COMBINE Workshop

    11 - 12 July 2016

    Brisbane, Australia

    Software Carpentry with R COMBINE Workshop https://tess.elixir-europe.org/events/software-carpentry-with-r-combine-workshop This Software Carpentry with R workshop is a tie-in to the 2016 UQ Winter School in Mathematical and Computational Biology. The workshop is being brought to you by COMBINE. Attendees must have registered for at least some part of the UQ Winter School. 2016-07-11 09:00:00 UTC 2016-07-12 00:00:00 UTC University of Queensland Brisbane, Australia Brisbane Australia Data architecture, analysis and design Computer science Bioinformatics [] [] [] workshops_and_courses [] ABRCOMBINEBioinformatics
  • Free training in Research Cloud Computing

    29 August - 19 September 2016

    Parkville, Australia

    Free training in Research Cloud Computing https://tess.elixir-europe.org/events/free-training-in-research-cloud-computing Research Platforms Services is holding a free introductory workshop in research cloud computing. Held over four consecutive Monday mornings from 29 August to 19 September, 10 am to 12 noon, this workshop will provide a basic intro to the NeCTAR research cloud - offering free on-demand computing and storage resources to researchers. It will cover how to start and connect to instances, use the command line, install software, back up data & manage security. 2016-08-29 09:00:00 UTC 2016-09-19 00:00:00 UTC University of Melbourne Room G08, Co Lab, The Old Quadrangle, Parkville, Australia Room G08, Co Lab, The Old Quadrangle Parkville Australia Data management Computer science [] [] [] workshops_and_courses [] ABR
  • MATLAB Beginners Workshop for Researchers

    29 - 30 August 2016

    Parkville, Australia

    MATLAB Beginners Workshop for Researchers https://tess.elixir-europe.org/events/matlab-beginners-workshop-for-researchers MATLAB is one of the standard tools in science & engineering. It is an extremely versatile high-level programming language that allows you to do pretty much anything: from controlling hardware to recording, analysing, and visualising data. Learn the basics of programming using MATLAB over 2 days from your fellow researchers in this workshop. And the best thing is that you can test small parts of your program immediately. In this workshop, we will cover how to write and use scripts, loops, functions, and conditionals. 2016-08-29 09:00:00 UTC 2016-08-30 00:00:00 UTC University of Melbourne Room G09, Co Lab, The Old Quadrangle, Parkville, Australia Room G09, Co Lab, The Old Quadrangle Parkville Australia Data management Software engineering Computer science [] [] [] workshops_and_courses [] ABR
  • Free workshop: Introduction to programming concepts

    7 September 2016

    Parkville, Australia

    Free workshop: Introduction to programming concepts https://tess.elixir-europe.org/events/free-workshop-introduction-to-programming-concepts Research Platforms Services is offering a free 2-hour workshop on Wednesday 7 September from 3pm - 5pm. Covering basic concepts that are universal to all programming languages: data types, data structures and control flow. No prior experience required. Suitable for those wishing to do a beginners course in such applications as R & R Studio, Matlab or Python. 2016-09-07 09:00:00 UTC 2016-09-07 00:00:00 UTC University of Melbourne Collaborative Learning space 1, Old Arts Building, Parkville, Australia Collaborative Learning space 1, Old Arts Building Parkville Australia Computer science Software engineering [] [] [] workshops_and_courses [] ABR
  • Advances in Computational Biology Conference 2019

    28 - 29 November 2019

    Barcelona, Spain

    Elixir node event
    Advances in Computational Biology Conference 2019 https://tess.elixir-europe.org/events/advances-in-computational-biology-conference-2019 The first **Advances in Computational Biology conference – _Fostering collaboration among women scientists_** will bring together researchers working on systems biology, omics technologies, artificial intelligence and high-performance computing with applications to biology from both the public and private sectors. One of the main purposes of the conference is to **visualize and promote the research done by women scientists** and for this reason, all presenters will be women, although the conference is open to everyone. We want to create a space to foster collaborations between scientists, providing an excellent opportunity to share ideas and build research networks. Topics included: - **Learning from Biological Sequences**: population genomics, evolutionary genomics, systems biology, transcriptomics, sequence analysis - **When Computational Biology meets Medicine**: biomedical applications, mutational landscapes, clinical genomics - **Machines Speeding up Research**: high performance computing, machine learning in the life sciences, imaging data analysis, dynamic simulations and algorithm development Key dates: - Open registration: May 6th, 2019 - Abstract submission opens: May 6th, 2019 - **Abstract submission deadline: July 1st, 2019** - Early bird registration deadline: September 15th, 2019 - Registration deadline: November 1st, 2019 - AdvCompBio Conference: November 28th - 29th, 2019 The programme will include poster and oral presentations, as well as keynotes from leading scientists in the computational biology and high-performance computing fields. The keynote speakers of the conference are: **Christine Orengo**, group leader of Orengo Group at University College London, **Natasa Przulj**, group leader of the Life Sciences – Integrative Computational Network Biology at the Barcelona Supercomputing Center and **Marie-Christine Sawley**, director of the Exascale Lab at Intel. The confirmed chairs of the conference are: **Alison Kennedy**, director of the STFC Hartree Centre, **Janet Kelso**, group leader of the Minerva Research Group for Bioinformatics at the Max Planck Institute for Evolutionary Anthropology, and **Nuria Lopez-Bigas**, leader of the Biomedical Genomics Research Group at the Institute for Research in Biomedicine Barcelona. Furthermore, the participants will have the opportunity to interact personally with female leaders in the fields of IT, academic research and politics that support the conference. The conference is organised by the Bioinfo4Women programme from the Barcelona Supercomputing Center (BSC-CNS) with the collaboration of IMIM-UPF Research Programme on Biomedical Informatics (GRIB), the Spanish National Bioinformatics Institute (INB/ELIXIR-ES) and the Universitat Politècnica de Catalunya (UPC). It is an affiliate conference of the International Society for Computational Biology (ISCB). 2019-11-28 09:00:00 UTC 2019-11-29 17:00:00 UTC La Pedrera, 92, Passeig de Gràcia, Barcelona, Spain La Pedrera, 92, Passeig de Gràcia Barcelona Barcelona Spain Imaging Machine learning Computational biology Computer science Biomedical science Sequence analysis Transcriptomics Evolutionary biology Population genomics Omics Systems biology Bioinformatics [] [] ResearchersPhD studentsPostdoctoral studentsComputer scienceComputational biologistsbioinformaticians meetings_and_conferences [] HPCBioinformaticsComputational BiologyArtificial IntelligenceGenomicsTranscriptomicsSystems biologyPopulation GenomicsEvolutinary genomicsSequence Analysisbiomedical applicationsmutational landscapesclinical genomicsImagingdynamic simulationsalgorithmsmachine learning

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