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  • Mouse Genome Informatics workshop

    27 October 2015

    Cambridge, United Kingdom

    Elixir node event
    Mouse Genome Informatics workshop https://tess.elixir-europe.org/events/mouse-genome-informatics-workshop-579098c1-61f1-486d-9df2-c1cec673442e [Mouse Genome Informatics (MGI)](http://www.informatics.jax.org) is the international database resource for the laboratory mouse and provides integrated genetic, genomic, and biological data to facilitate the study of human health and disease. MGI is a free, highly curated resource and offers web and programmatic access to a complete catalogue of mouse genes and genome features, functional annotations, a comprehensive catalogue of mutant and knockout alleles, phenotype and human disease model annotations, gene expression, variation and sequence data. This workshop will be composed of ~20min overview and ~1 hour hands-on, interactive tutorial. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Mouse%20Genome%20Informatics%20workshop_bioinfo-mgi_27.10.2015_1541354&CourseName=Mouse%20Genome%20Informatics%20workshop&CourseDate=27.10.2015&CourseDuration=0.5&EventID=1541354).'' 2015-10-27 10:00:00 UTC 2015-10-27 12:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] other model organisms studies human diseases or developmental biology Postdocs and Staff members from the University of Cambridge Institutions and other external Institutions or individuals workshops_and_courses [] []
  • Foundation skills for HPC in computational biomolecular research - BioExcel Summer School

    3 - 7 July 2017

    Cambridge, United Kingdom

    Elixir node event
    Foundation skills for HPC in computational biomolecular research - BioExcel Summer School https://tess.elixir-europe.org/events/foundation-skills-for-hpc-in-computational-biomolecular-research-bioexcel-summer-school This 5-day BioExcel Summer School will use project-based learning to empower life scientists to get the most out of using computers. 2017-07-03 10:00:00 UTC 2017-07-07 14:00:00 UTC European Bioinformatics Institute (EMBL-EBI), Cambridge, United Kingdom European Bioinformatics Institute (EMBL-EBI) Cambridge United Kingdom CB10 1SD [] Charlotte Pearton [] Any students, postdocs or RAs with an interest in HPC 30 workshops_and_courses registration_of_interest HDRUK
  • IAFIG-RMS: Bioimage analysis with Python

    9 - 13 December 2019

    Cambridge, United Kingdom

    Elixir node event
    IAFIG-RMS: Bioimage analysis with Python https://tess.elixir-europe.org/events/iafig-rms-bioimage-analysis-with-python The aim of this 5 days course is to develop motivated participants toward becoming independent BioImage Analysts in an imaging facility or research role. Participants will be taught theory and algorithms relating to bioimage analysis using Python as the primary coding language. Lectures will focus on image analysis theory and applications. Topics to be covered include: Image Analysis and image processing, Python and Jupyter notebooks, Visualisation, Fiji to Python, Segmentation, Omero and Python, Image Registration, Colocalisation, Time-series analysis, Tracking, Machine Learning, and Applied Machine Learning. The bulk of the practical work will focus on Python and how to code algorithms and handle data using Python. Fiji will be used as a tool to facilitate image analysis. Omero will be described and used for some interactive coding challenges. Research spotlight talks will demonstrate research of instructors/scientists using taught techniques in the wild. This event is organized in collaboration with the [Image Analysis Focused Interest Group](http://iafig-rms.org/) and is sponsored by the [Royal Microscopical Society](https://www.rms.org.uk/). The training room is located on the first floor and there is currently no wheelchair or level access available to this level. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3129158&amp;course-title=BioImage%20analysis%20with%20Python).'' 2019-12-09 09:30:00 UTC 2019-12-13 17:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Data visualisation Data mining Biological imaging Bioinformatics University of Cambridge Bioinformatics Training [] Cell BiologistsBiophysicistsBioImage Analysts with some experience of basic microscopy image analysisThis course may be of interest to physical scientists looking to develop their knowledge of Python coding in the context of bioimage analysisThis course is appropriate for researchers who are relatively proficient with computers but maybe not had the time or resources available to become programmers.The course is open to Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals<span style="color:#FF0000">Please note that all participants attending this course will be charged a registration fee. <span style="color:#0000FF"> Members of Industry to pay 575.00 GBP. </span style> <span style="color:#0000FF">All Members of the University of CambridgeAffiliated Institutions and other academic participants from External Institutions and Charitable Organizations to pay 250.00 GBP. </span style> <span style="color:#FF0000">A booking will only be approved and confirmed once the fee has been paid in full.</span style> workshops_and_courses [] HDRUK
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