Biological data analysis using InterMine
26 November 2015
Cambridge, United KingdomBiological data analysis using InterMine http://training.csx.cam.ac.uk/bioinformatics/event/1539952 https://tess.elixir-europe.org/events/biological-data-analysis-using-intermine [InterMine](http://intermine.org/) is a freely available data warehouse and analysis software system that has been used to create a suite of databases for the analysis of large and complex biological data sets. InterMine-based data analysis platforms are available for many organisms including [mouse](http://www.mousemine.org/mousemine/begin.do), [rat](http://ratmine.mcw.edu/ratmine/begin.do), [budding yeast](http://yeastmine.yeastgenome.org/yeastmine/begin.do), [plants](https://apps.araport.org/thalemine/begin.do), [nematodes](http://www.wormbase.org/tools/wormmine/begin.do), [fly](http://www.flymine.org/), [zebrafish](http://www.zebrafishmine.org/) and more recently [human](http://www.humanmine.org/). The InterMine web interface offers sophisticated query and visualisation tools, as well as comprehensive web services for bioinformaticians. Genomic and proteomic data within InterMine databases includes pathways, gene expression, interactions, sequence variants, GWAS, regulatory data and protein expression. We have recently re-designed the InterMine interface to provide a more intuitive user-experience. This workshop will provide an overview of key features of the new interface and how this can be used to interrogate genomic and proteomic data. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Biological%20data%20analysis%20using%20InterMine_bioinfo-intermine_26.11.2015_1539952&CourseName=Biological%20data%20analysis%20using%20InterMine&CourseDate=26.11.2015&CourseDuration=0.5&EventID=1539952).'' 2015-11-26 09:30:00 UTC 2015-11-26 12:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training  The course is aimed at bench biologists who need to analyse their own data against large biological datasetsor who need to search against several biological datasets to gain knowledge of a gene/gene setbiological process or function. The course may also be of interest to bioinformaticians who wish to familiarise themselves with the InterMine suite of databasesalthough the webservices will not be covered in detail.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses  HDRUK
COSMIC: Exploring cancer genetics at high resolution
26 September 2016
Cambridge, United KingdomCOSMIC: Exploring cancer genetics at high resolution http://training.csx.cam.ac.uk/bioinformatics/event/1887812 https://tess.elixir-europe.org/events/cosmic-exploring-cancer-genetics-at-high-resolution [COSMIC](http://cancer.sanger.ac.uk) is an expert-curated database of somatic mutations causing human cancer. Broad and comprehensive in scope, it describes over 4 million coding mutations across all human cancer disease types, and encompasses over 20 million somatic variants across other molecular mutation mechanisms in oncogenetics. Mutations are annotated across the entire genome, with deep-resolution expert curation focused on almost 200 key cancer genes. This course will use the live COSMIC website and genome browser to show you how to access and explore this information, seeking to identify genetic causes and targets in all human cancers. A timetable for this event is available [here](http://bioinfotraining.bio.cam.ac.uk/postgraduate/services/bioinfo-cosmic). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=1887812&course-title=COSMIC:%20Exploring%20cancer%20genetics%20at%20high%20resolution).'' 2016-09-26 08:30:00 UTC 2016-09-26 11:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training  This course is aimed at scientists and informaticians interested in the genetics of cancerencompassing all aspects of academic researchdata integration and visualisationand industrial investigations into diagnostic and pharmaceutical design across all human cancers.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses  HDRUK
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