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  • Bioinformatics for Principal Investigators

    20 - 21 September 2016

    Cambridge, United Kingdom

    Elixir node event
    Bioinformatics for Principal Investigators https://tess.elixir-europe.org/events/bioinformatics-for-principal-investigators-304ffc9c-9844-4138-b1e4-b2d3d723f6d7 The aim of this workshop is to introduce principal investigators to the challenges of working with biological data, to provide guidance on how to manage such data and to encourage the development of bioinformatics skills in their team. A timetable for this workshop can be found [here](http://bioinfotraining.bio.cam.ac.uk/postgraduate/specialized/bioinfo-PIs). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to Book or register Interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=1798944&course-title=Bioinformatics%20for%20Principal%20Investigators).'' 2016-09-20 08:00:00 UTC 2016-09-21 16:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] Principal Investigators from the University of CambridgeInstitutions and other external Institutionswho are using or planning to use bioinformatics in their research workshops_and_courses [] HDRUK
  • COSMIC: Exploring cancer genetics at high resolution

    26 September 2016

    Cambridge, United Kingdom

    Elixir node event
    COSMIC: Exploring cancer genetics at high resolution https://tess.elixir-europe.org/events/cosmic-exploring-cancer-genetics-at-high-resolution [COSMIC](http://cancer.sanger.ac.uk) is an expert-curated database of somatic mutations causing human cancer. Broad and comprehensive in scope, it describes over 4 million coding mutations across all human cancer disease types, and encompasses over 20 million somatic variants across other molecular mutation mechanisms in oncogenetics. Mutations are annotated across the entire genome, with deep-resolution expert curation focused on almost 200 key cancer genes. This course will use the live COSMIC website and genome browser to show you how to access and explore this information, seeking to identify genetic causes and targets in all human cancers. A timetable for this event is available [here](http://bioinfotraining.bio.cam.ac.uk/postgraduate/services/bioinfo-cosmic). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=1887812&course-title=COSMIC:%20Exploring%20cancer%20genetics%20at%20high%20resolution).'' 2016-09-26 08:30:00 UTC 2016-09-26 11:30:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] This course is aimed at scientists and informaticians interested in the genetics of cancerencompassing all aspects of academic researchdata integration and visualisationand industrial investigations into diagnostic and pharmaceutical design across all human cancers.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • EMBL-EBI: Network Analysis with Cytoscape and PSICQUIC

    14 March 2018

    Cambridge, United Kingdom

    Elixir node event
    EMBL-EBI: Network Analysis with Cytoscape and PSICQUIC https://tess.elixir-europe.org/events/embl-ebi-network-analysis-with-cytoscape-and-psicquic-a1bc2199-1d0a-4733-b005-e449ffe49762 This module provides an introduction to the theory and concepts of network analysis. Attendees will learn how to construct protein-protein interaction networks and subsequently use these to analyse large-scale datasets generated these to by techniques such as RNA-Seq or mass-spec proteomics. The course will focus on giving attendees hands-on experience in the use of Cytoscape and selected network analysis apps. Also note: This event is part of a series of short introductions focusing on EMBL-EBI resources. If you want to learn more about these separate training events, see the [[#Related|Related Courses]] section below. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=2238825&course-title=EMBL-EBI:%20Network%20Analysis%20with%20Cytoscape%20and%20PSICQUIC).'' 2018-03-14 09:30:00 UTC 2018-03-14 17:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] This workshop is aimed at researchers interested in proteinsnetwork analysisprotein-protein interactions and related areasGraduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • EMBL-EBI: Network Analysis with Cytoscape and PSICQUIC

    22 May 2019

    Cambridge, United Kingdom

    Elixir node event
    EMBL-EBI: Network Analysis with Cytoscape and PSICQUIC https://tess.elixir-europe.org/events/embl-ebi-network-analysis-with-cytoscape-and-psicquic-3f2249e3-f528-42c2-abb1-d82d0c9eb56c This module provides an introduction to the theory and concepts of network analysis. Attendees will learn how to construct protein-protein interaction networks and subsequently use these to analyse large-scale datasets generated these to by techniques such as RNA-Seq or mass-spec proteomics. The course will focus on giving attendees hands-on experience in the use of Cytoscape and selected network analysis apps. Also note: This event is part of a series of short introductions focusing on EMBL-EBI resources. If you want to learn more about these separate training events, see the [[#Related|Related Courses]] section below. The training room is located on the first floor and there is currently no wheelchair or level access available to this level. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=2851665&course-title=EMBL-EBI:%20Network%20Analysis%20with%20Cytoscape%20and%20PSICQUIC).'' 2019-05-22 08:30:00 UTC 2019-05-22 16:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] This workshop is aimed at researchers interested in proteinsnetwork analysisprotein-protein interactions and related areasGraduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • COSMIC: Integrating and interpreting the world’s knowledge of somatic mutations in cancer

    4 June 2019

    Cambridge, United Kingdom

    Elixir node event
    COSMIC: Integrating and interpreting the world’s knowledge of somatic mutations in cancer https://tess.elixir-europe.org/events/cosmic-integrating-and-interpreting-the-world-s-knowledge-of-somatic-mutations-in-cancer [COSMIC](http://cancer.sanger.ac.uk), the Catalogue of Somatic Mutations in Cancer, is the world’s largest and most comprehensive expert manually curated resource for exploring the impact of somatic mutations in human cancer. Based at the Wellcome Sanger Institute and available publicly at https://cancer.sanger.ac.uk/cosmic, the latest release includes almost 6 million coding mutations across 1.4 million samples from over 26,000 papers. COSMIC captures the full spectrum of genomic data relating to somatic mutations, so in addition to coding mutations, gene fusions, non-coding mutations, copy-number variants, methylation and drug resistance mutations are included. This course will use the live COSMIC website and tools to show you how to access and explore this information, seeking to identify genetic causes and targets in all human cancers. The training room is located on the first floor and there is currently no wheelchair or level access available to this level. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=2887770&course-title=COSMIC).'' 2019-06-04 08:30:00 UTC 2019-06-04 11:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] This course is aimed at scientistsclinicians and informaticians interested in cancer geneticsencompassing all aspects of academic researchdata integration and visualisationand industrial investigations into diagnostic and pharmaceutical design across all human cancers.Graduate studentsPostdocs and Staff members from the University of CambridgeInstitutions and other external Institutions or individuals workshops_and_courses [] HDRUK
  • Bioinformatics for Principal Investigators

    16 - 17 September 2019

    Cambridge, United Kingdom

    Elixir node event
    Bioinformatics for Principal Investigators https://tess.elixir-europe.org/events/bioinformatics-for-principal-investigators-295ef296-f98b-471c-842e-32786d63fd1e The aim of this workshop is to provide principal investigators with an introduction to the challenges of working with biological data and to the best practices, and tools, needed to perform bioinformatics research effectively and reproducibly. On day 1, we will cover the importance of experimental design, discuss the challenges associated with (i) the analysis of high-throughput sequencing data (utilising RNA-seq as a working example) and (ii) the application of machine learning algorithms, as well as issues relating to reusability and reproducibility. On day 2, we will put into practice concepts from day 1, running a RNA-seq data analysis pipeline, going from raw reads through differential expression analysis and the interpretation of downstream analysis results. Challenges encountered at each step of the analytical pipeline will be discussed. Please note that day 2 is optional. The training room is located on the first floor and there is currently no wheelchair or level access available to this level. Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book or register your interest by linking [here](http://bioinfotraining.bio.cam.ac.uk/booking-form/?event-id=3070941&course-title=Bioinformatics%20for%20Principal%20Investigators).'' 2019-09-16 08:30:00 UTC 2019-09-17 16:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR Bioinformatics University of Cambridge Bioinformatics Training [] Principal Investigators from the University of CambridgeInstitutions and other external Institutionswho are using or planning to use bioinformatics in their research workshops_and_courses [] HDRUK

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