Event types: Workshops and courses
Epigenomic Data Analysis
15 - 16 June 2017
Montreal, CanadaEpigenomic Data Analysis https://bioinformatics.ca/workshops/2017/epigenomic-data-analysis-2017 https://tess.elixir-europe.org/events/epigenomic-data-analysis-814bc674-0a0a-42a1-9bd5-bbc43ae8b2b6 High-throughput sequencing of Chromatin-Immunoprecipitated libraries (ChIP-seq) and of bisulfite converted DNA (WGBS) have become increasingly common and have largely supplanted microarrays for chromatin and DNA methylation profiling. When processed appropriately, ChIP-seq data provides base-pair resolution representations of transcription factor DNA-binding events and nucleosome (histone) modifications genome-wide. Similarly, WGBS can provide a quantitative genome wide profile of cytosine methylation. The CBW has developed a 2-day course providing an introduction to histone ChIP-seq and WGBS data analysis followed by integrated tutorials demonstrating the use of open source ChIP-Seq and WGBS analysis packages. The tutorials are designed as self-contained units that include example data and detailed instructions for installation of all required bioinformatics tools (FASTQC, BWA, MACS2, FindER, samtools, Picard, BisSNP). The course also includes an overview of integrative epigenomic tools that have been developed to explore ChIP-Seq and WGBS data together with other epigenomic datasets such as RNA-seq, DHS-seq and ATAC-seq. Participants will gain practical experience and skills to be able to: Align ChIP-seq and WGBS sequence data to a reference genome (required) Identify narrow and broad peaks from ChIP-seq data Identify methylated levels from WGBS data Visualize and summarize the output of ChIP-Seq and WGBS analyses Explore integrative tools for epigenomic data sets 2017-06-15 08:30:00 UTC 2017-06-16 17:00:00 UTC bioinformatics.ca Montreal, Montreal, Canada Montreal Montreal Montreal Canada ChIP-seq Epigenomics  firstname.lastname@example.org   30 workshops_and_courses registration_of_interest 
WikiPathways Summit 2018
8 - 10 October 2018
San Francisco, United States of AmericaWikiPathways Summit 2018 https://gladstone.org/WP18Summit https://tess.elixir-europe.org/events/wikipathways-summit-2018 To celebrate 10 years of open science, the WikiPathways team is hosting a 3-day summit at Gladstone Institutes in San Francisco featuring seminars and hands-on workshops. Each day of the event is themed to serve the various communities of users and contributors working with biological pathways. Anyone interested in pathways is welcome to attend. No prior experience with WikiPathways is required. 2018-10-08 09:00:00 UTC 2018-10-10 17:00:00 UTC The WikiPathways Project 1650 Owens St, 1650, Owens Street, San Francisco, United States of America 1650 Owens St, 1650, Owens Street San Francisco San Francisco County United States of America Systems biology Metabolomics Gladstone InstitutesMaastricht University  Researchersbiocuratorsbioinformaticians meetings_and_conferencesworkshops_and_courses  Pathway analysisMetabolic pathwayBiological databases
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