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4 events found

Event types: Workshops and courses 

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Organizer: BITS  or VIB  or Paulo Gavaia  or bioinformatics.ca 

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City: Bogota  or Alberta  or Berkeley  or Montreal  or Gent  or Munich  or San Francisco  or Faro 

  • Comparative genomics in eukaryotes

    25 November 2011

    Gent, Belgium

    Comparative genomics in eukaryotes https://tess.elixir-europe.org/events/comparative-genomics-in-eukaryotes 2011-11-25 00:00:00 UTC 2011-11-25 00:00:00 UTC BITS Tech Park Zwijnaarde, Gent, Belgium Tech Park Zwijnaarde Gent Belgium [] [] [] workshops_and_courses [] []
  • Mass spec data processing

    16 December 2011

    Gent, Belgium

    Mass spec data processing https://tess.elixir-europe.org/events/mass-spec-data-processing 2011-12-16 00:00:00 UTC 2011-12-16 00:00:00 UTC BITS Tech Park Zwijnaarde, Gent, Belgium Tech Park Zwijnaarde Gent Belgium [] [] [] workshops_and_courses [] []
  • Zebrafish as a Model in Biomedicine and Study of Human Diseases - 3rd Edition

    21 April 2017

    Faro, Portugal

    Zebrafish as a Model in Biomedicine and Study of Human Diseases - 3rd Edition https://tess.elixir-europe.org/events/zebrafish-as-a-model-in-biomedicine-and-study-of-human-diseases-3rd-edition This course was designed to provide basic knowledge on the use of the biological model zebrafish with main emphasis on its use in the context of the study of human diseases and biomedical sciences. Introduction to genetic manipulation and production of transgenic lines and "knock-out". It is intended to transfer skills for manipulation and use of the zebrafish in genetic manipulation techniques, applications of transgenics and mutants for study of phenotypes of interest, microinjection and studies of tissue regeneration. 2017-04-21 09:00:00 UTC 2017-04-21 18:00:00 UTC Paulo Gavaia University of the Algarve, Campus do Gambelas, Gambelas, Faro, Faro, Portugal University of the Algarve, Campus do Gambelas, Gambelas, Faro Faro Portugal Human disease Model organisms CCMAR, Centre for Marine Sciences Paulo Gavaia - pgavaia@ualg.pt [] [] workshops_and_courses first_come_first_served zebrafishhuman diseasebiomedicinetransgenic lines
  • Epigenomic Data Analysis

    15 - 16 June 2017

    Montreal, Canada

    Epigenomic Data Analysis https://tess.elixir-europe.org/events/epigenomic-data-analysis-814bc674-0a0a-42a1-9bd5-bbc43ae8b2b6 High-throughput sequencing of Chromatin-Immunoprecipitated libraries (ChIP-seq) and of bisulfite converted DNA (WGBS) have become increasingly common and have largely supplanted microarrays for chromatin and DNA methylation profiling. When processed appropriately, ChIP-seq data provides base-pair resolution representations of transcription factor DNA-binding events and nucleosome (histone) modifications genome-wide. Similarly, WGBS can provide a quantitative genome wide profile of cytosine methylation. The CBW has developed a 2-day course providing an introduction to histone ChIP-seq and WGBS data analysis followed by integrated tutorials demonstrating the use of open source ChIP-Seq and WGBS analysis packages. The tutorials are designed as self-contained units that include example data and detailed instructions for installation of all required bioinformatics tools (FASTQC, BWA, MACS2, FindER, samtools, Picard, BisSNP). The course also includes an overview of integrative epigenomic tools that have been developed to explore ChIP-Seq and WGBS data together with other epigenomic datasets such as RNA-seq, DHS-seq and ATAC-seq. Participants will gain practical experience and skills to be able to: Align ChIP-seq and WGBS sequence data to a reference genome (required) Identify narrow and broad peaks from ChIP-seq data Identify methylated levels from WGBS data Visualize and summarize the output of ChIP-Seq and WGBS analyses Explore integrative tools for epigenomic data sets 2017-06-15 08:30:00 UTC 2017-06-16 17:00:00 UTC bioinformatics.ca Montreal, Montreal, Canada Montreal Montreal Montreal Canada ChIP-seq Epigenomics [] course_info@bioinformatics.ca [] [] 30 workshops_and_courses registration_of_interest []

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