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74 events found

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  • Probability Theory and Network Inference

    8 - 11 November 2011

    Basel, Switzerland

    Probability Theory and Network Inference https://tess.elixir-europe.org/events/probability-theory-and-network-inference 2011-11-08 00:00:00 UTC 2011-11-11 00:00:00 UTC SIB Swiss Institute of Bioinformatics Biozentrum, Basel, Switzerland Biozentrum Basel Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • 6th Workshop on Machine Learning in Systems Biology

    9 - 10 September 2012

    Basel, Switzerland

    6th Workshop on Machine Learning in Systems Biology https://tess.elixir-europe.org/events/6th-workshop-on-machine-learning-in-systems-biology 2012-09-09 00:00:00 UTC 2012-09-10 00:00:00 UTC Workshop at ECCB2012 Congress Center Basel, Basel, Switzerland Congress Center Basel Basel Switzerland Systems biology [] [] [] meetings_and_conferences [] OtherEventsISCB
  • European Conference on Computational Biology 2012

    9 - 12 September 2012

    Basel, Switzerland

    European Conference on Computational Biology 2012 https://tess.elixir-europe.org/events/european-conference-on-computational-biology-2012 2012-09-09 00:00:00 UTC 2012-09-12 00:00:00 UTC SIB Congress Center Basel, Basel, Switzerland Congress Center Basel Basel Switzerland Bioinformatics [] [] [] meetings_and_conferences [] []
  • AIMM2012

    10 September 2012

    Basel, Switzerland

    AIMM2012 https://tess.elixir-europe.org/events/aimm2012 2012-09-10 00:00:00 UTC 2012-09-10 00:00:00 UTC European Conference on Computational Biology Congress Center Basel, Basel, Switzerland Congress Center Basel Basel Switzerland Bioinformatics [] [] [] meetings_and_conferences [] OtherEventsISCB
  • Jalview workshop

    29 May 2013

    Basel, Switzerland

    Jalview workshop https://tess.elixir-europe.org/events/jalview-workshop 2013-05-29 00:00:00 UTC 2013-05-29 00:00:00 UTC SIB Basel, Switzerland Basel Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • Jalview workshop

    29 May 2013

    Basel, Switzerland

    Jalview workshop https://tess.elixir-europe.org/events/jalview-workshop-6ab721ad-dd53-476f-8e67-27248dd2e18c 2013-05-29 00:00:00 UTC 2013-05-29 00:00:00 UTC SIB Basel, Switzerland Basel Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • Genetic Variation and Human Health

    4 - 5 July 2013

    Basel, Switzerland

    Genetic Variation and Human Health https://tess.elixir-europe.org/events/genetic-variation-and-human-health 2013-07-04 01:00:00 UTC 2013-07-05 01:00:00 UTC SIB Basel, Switzerland Basel Switzerland Genomics Bioinformatics [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • Best practices in programming 2013

    22 - 23 October 2013

    Basel, Switzerland

    Best practices in programming 2013 https://tess.elixir-europe.org/events/best-practices-in-programming-2013 2013-10-22 01:00:00 UTC 2013-10-23 01:00:00 UTC SIB Basel, Switzerland Basel Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • Molecular Operating Environment (MOE) workshop

    30 - 31 October 2013

    Basel, Switzerland

    Molecular Operating Environment (MOE) workshop https://tess.elixir-europe.org/events/molecular-operating-environment-moe-workshop 2013-10-30 00:00:00 UTC 2013-10-31 00:00:00 UTC SIB/Chemical Computing Group Basel, Switzerland Basel Switzerland Systems biology Proteomics Bioinformatics [] [] [] workshops_and_courses [] []
  • Understanding omics data

    19 - 21 November 2013

    Basel, Switzerland

    Understanding omics data https://tess.elixir-europe.org/events/understanding-omics-data 2013-11-19 00:00:00 UTC 2013-11-21 00:00:00 UTC diXa Genedata Academy, Basel, Switzerland Genedata Academy Basel Switzerland Systems biology Proteomics Genomics Bioinformatics [] [] [] workshops_and_courses [] toxicologytoxicogenomics
  • World Congress on NeuroTherapeutics: Dilemmas, Debates & Discussions

    4 - 7 July 2014

    Basel, Switzerland

    World Congress on NeuroTherapeutics: Dilemmas, Debates & Discussions https://tess.elixir-europe.org/events/world-congress-on-neurotherapeutics-dilemmas-debates-discussions 2014-07-04 01:00:00 UTC 2014-07-07 01:00:00 UTC CongressMed Basel, Switzerland Basel Switzerland Pharmacology Medicine [] [] [] meetings_and_conferences [] neuroscience
  • Best practices in programming

    21 - 22 October 2014

    Basel, Switzerland

    Best practices in programming https://tess.elixir-europe.org/events/best-practices-in-programming-e82eb9d1-27b2-41e2-adcb-bd9a86c4cc9d 2014-10-21 01:00:00 UTC 2014-10-22 01:00:00 UTC SIB Basel, Switzerland Basel Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • Learning Python for life sciences

    1 - 3 December 2014

    Basel, Switzerland

    Learning Python for life sciences https://tess.elixir-europe.org/events/learning-python-for-life-sciences 2014-12-01 00:00:00 UTC 2014-12-03 00:00:00 UTC SIB Basel, Switzerland Basel Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • Reproducible Research

    26 January 2015

    Basel, Switzerland

    Reproducible Research https://tess.elixir-europe.org/events/reproducible-research-d9d1a6ea-293b-4f63-9ee6-ab5385de7d48 2015-01-26 00:00:00 UTC 2015-01-26 00:00:00 UTC SIB Basel, Switzerland Basel Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • Statistical techniques for genomics/life sciences

    9 - 12 February 2015

    Basel, Switzerland

    Statistical techniques for genomics/life sciences https://tess.elixir-europe.org/events/statistical-techniques-for-genomics-life-sciences 2015-02-09 00:00:00 UTC 2015-02-12 00:00:00 UTC SIB Basel, Switzerland Basel Switzerland Genomics Bioinformatics [] [] [] workshops_and_courses [] []
  • Data Visualization in Life Sciences

    20 March 2015

    Basel, Switzerland

    Data Visualization in Life Sciences https://tess.elixir-europe.org/events/data-visualization-in-life-sciences 2015-03-20 00:00:00 UTC 2015-03-20 00:00:00 UTC SIB Basel, Switzerland Basel Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • [BC]2 Basel Computational Biology Conference

    7 - 10 June 2015

    Basel, Switzerland

    [BC]2 Basel Computational Biology Conference https://tess.elixir-europe.org/events/bc-2-basel-computational-biology-conference 2015-06-07 01:00:00 UTC 2015-06-10 01:00:00 UTC SIB Basel, Switzerland Basel Switzerland Bioinformatics [] [] [] meetings_and_conferences [] ISCBOtherEvents
  • SIB Protein Bioinformatics course Protein analysis using SIB web-based tools

    15 - 19 June 2015

    Basel, Switzerland

    SIB Protein Bioinformatics course Protein analysis using SIB web-based tools https://tess.elixir-europe.org/events/sib-protein-bioinformatics-course-protein-analysis-using-sib-web-based-tools 2015-06-15 01:00:00 UTC 2015-06-19 01:00:00 UTC SIB Basel, Switzerland Basel Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • NGS data analysis course, Pontificia Universidad Javeriana, Bogota, November 2015

    23 - 24 November 2015

    Bogota, Colombia

    Elixir node event
    NGS data analysis course, Pontificia Universidad Javeriana, Bogota, November 2015 https://tess.elixir-europe.org/events/ngs-data-analysis-course-pontificia-universidad-javeriana-bogota-november-2015 This course is organised for professionals in life sciences and biomedical sciences, preferably researchers or graduate students who are conducting or planning to conduct investigations that require the bioinformatic analysis of data from omics technologies of high throughput sequencing or next generation (NGS). 2015-11-23 16:15:00 UTC 2015-11-24 16:15:00 UTC Pontificia Universidad Javeriana, Bogota, Colombia Pontificia Universidad Javeriana Bogota Colombia [] Maria Bacadare Goitia [] [] [] [] []
  • Protein Bioinformatics: Sequence-Structure-Function

    25 - 28 January 2016

    Basel, Switzerland

    Protein Bioinformatics: Sequence-Structure-Function https://tess.elixir-europe.org/events/protein-bioinformatics-sequence-structure-function 2016-01-25 00:00:00 UTC 2016-01-28 00:00:00 UTC SIB Basel, Switzerland Basel Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • Installing and configuring Linux Ubuntu for bioinformatics

    7 April 2016

    Canberra, Australia

    Installing and configuring Linux Ubuntu for bioinformatics https://tess.elixir-europe.org/events/installing-and-configuring-linux-ubuntu-for-bioinformatics CBBU, COMBINE, and SCU are organizing a series of introductory bioinformatics and statistics workshops. The workshops are primarily aimed at students, postdocs and early-mid career researchers, but are open to everybody from our College. 2016-04-07 09:00:00 UTC 2016-04-07 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Bioinformatics [] [] [] workshops_and_courses [] ABRBioinformatics
  • Software Carpentry Introduction to Programming with R and Use of Unix Shell and Git, plus Data Carpentry Processing and Visualization of Genomic Datasets

    11 - 13 April 2016

    Canberra, Australia

    Software Carpentry Introduction to Programming with R and Use of Unix Shell and Git, plus Data Carpentry Processing and Visualization of Genomic Datasets https://tess.elixir-europe.org/events/software-carpentry-introduction-to-programming-with-r-and-use-of-unix-shell-and-git-plus-data-carpentry-processing-and-visualization-of-genomic-datasets Workshops in bioinformatics and statistics CBBU, COMBINE, and SCU are organizing a series of introductory bioinformatics and statistics workshops. The workshops are primarily aimed at students, postdocs and early-mid career researchers, but are open to everybody from our College. 2016-04-11 09:00:00 UTC 2016-04-13 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Bioinformatics Data visualisation Data management [] [] [] workshops_and_courses [] ABRBioinformaticsSoftwareCarpentry
  • Experimental design and statistics

    17 May 2016

    Canberra, Australia

    Experimental design and statistics https://tess.elixir-europe.org/events/experimental-design-and-statistics This workshop will be run in the form of five 2-hour long sessions. There will be two sessions per week starting from mid-May. Preliminary dates are May 17th, 20th, 24th, 27th, and June 3rd. The times and venues are: Tue May 17 - 1 - 3pm, Slatyer Seminar Room Fri May 20 - 10am - 12pm, Gould Seminar Room Tue May 24 - 1 - 3pm, RN Robertson boardroom Fri May 27 - 10am - 12pm, Slatyer Seminar Room Fri Jun 3 - 10am - 12pm in STB-S1 at The Sciences Teaching Bldg. 2016-05-17 09:00:00 UTC 2016-05-17 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Data architecture, analysis and design Bioinformatics [] [] [] workshops_and_courses [] ABRBioinformatics
  • Software carpentry introduction to programming with Python and use of Unix Shell and Git

    30 May - 1 June 2016

    Canberra, Australia

    Software carpentry introduction to programming with Python and use of Unix Shell and Git https://tess.elixir-europe.org/events/software-carpentry-introduction-to-programming-with-python-and-use-of-unix-shell-and-git Workshops in bioinformatics and statistics CBBU, COMBINE, and SCU are organizing a series of introductory bioinformatics and statistics workshops. The workshops are primarily aimed at students, postdocs and early-mid career researchers, but are open to everybody from our College. This workshop is for novices and doesn't require any prior knowledge in Python, Git or Shell. The cost is $90 AUD to cover lunches and teas. It possible to pay with the GLC or bank transfer. Anybody interested please register no later than 22 May. 2016-05-30 09:00:00 UTC 2016-06-01 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Bioinformatics Data architecture, analysis and design [] [] [] workshops_and_courses [] ABRBioinformaticsSoftwareCarpentry
  • Detecting Mutations with Short-Read Sequencing

    15 July 2016

    Canberra, Australia

    Detecting Mutations with Short-Read Sequencing https://tess.elixir-europe.org/events/detecting-mutations-with-short-read-sequencing Reed A. Cartwright, Arizona State University Studying the process of de novo mutation from deep-sequencing of related samples is a difficult task. Because de novos are rare, artifacts generated by experimental and biological error tend to be more common than true positives. While de novos can be identified through validation, this is a slow process. In order to estimate mutation rates on large datasets in an automated way, we need to develop new probabilistic models that can handle sources of false positives. In this talk I will be discussing new computational methods to detect de novo mutations and their application to three different systems: human trios, ciliate mutation accumulation experiments, and yellow box eucalyptus. TIC Techniques In Computational Genomics A community of researchers engaged in, or dependent on, computational analysis of genomic data Weekly seminars by volunteers Drop-in sessions/round-table discussions convened by the Genome Discovery Unit (GDU) Venue alternates between JCSMR and RSB, ANU. To be added to TIC email list please contact marcin.adamski@anu.edu.au 2016-07-15 09:00:00 UTC 2016-07-15 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Computational biology Bioinformatics [] [] [] meetings_and_conferences [] BioinformaticsABR
  • Introduction to R and RStudio

    31 October 2016

    Canberra, Australia

    Introduction to R and RStudio https://tess.elixir-europe.org/events/introduction-to-r-and-rstudio Introduction to R and RStudio co-organized with Teresa Neeman from Australian National University Statistical Consulting Unit. The workshop will be over 2 half-days 31/10 and 1/11 9:30am - 1:30pm, and will cover basic concepts in R, including: introduction to R and RStudio, importing and graphing data, basic data processing, and statistics, good coding practice. The short course will help you to be more confident using R and will prepare you for understanding statistical modelling in R. This workshop is for R and RStudio novices. No previous experience in R or RStudio is expected. We especially invite mid-year honours students. Please note that this workshop was already advertised to honours students by Giel Van Dooren. To sign up please email no later than October 7th. The workshops are offered at no cost. 2016-10-31 09:00:00 UTC 2016-10-31 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Data visualisation Data management [] [] [] workshops_and_courses [] ABRBioinformatics
  • Data Processing in R for beginners

    8 November 2016

    Canberra, Australia

    Data Processing in R for beginners https://tess.elixir-europe.org/events/data-processing-in-r-for-beginners Data Processing in R for beginners co-organized with Janet Gardner from EEG. This will be a 6 hours workshop on 8/11 9:30 - 12:30 - lunch break - 1:00pm - 4:00pm and will be covering: Brief introduction to R and RStudio. Data types in R, and type conversions. Loading and saving tab and coma delimited files. Data exploration: basic statistic (mean, std. deviation and so on), basic plots (dotplots and histograms). Data sub-setting and filtering. Adding new columns with calculated values. Find-and-replace for values in a column. Detecting and handling errors an missing values in the data. Designing an appropriate structure for a spreadsheet. Joining datasets. Programming - creating functions in R. To sign up please email marcin.adamski@anu.edu.au no later than October 7th. The workshops are offered at no cost. 2016-11-08 09:00:00 UTC 2016-11-08 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Bioinformatics Data visualisation Data management [] [] [] workshops_and_courses [] ABRBioinformatics
  • Data Processing in R for advanced users

    15 November 2016

    Canberra, Australia

    Data Processing in R for advanced users https://tess.elixir-europe.org/events/data-processing-in-r-for-advanced-users Data Processing in R for advanced users co- organized with Janet Gardner from EEG. This will be a 6 hours workshop on 15/11 9:30 - 12:30 - lunch break - 1:00pm - 4:00pm covering the same subjects as workshop #2 but will be much more focused on writing code (programming in R) and practical exercises and will skip the basics. To sign up please email marcin.adamski@anu.edu.au no later than October 7th. The workshops are offered at no cost. 2016-11-15 09:00:00 UTC 2016-11-15 00:00:00 UTC Australian National University Canberra, Australia Canberra Australia Bioinformatics Data visualisation Data management [] [] [] workshops_and_courses [] ABRBioinformatics
  • Benchmarking: Incentives and Best Practises across Scientific Disciplines - Abstracting from Established Evaluations

    12 September 2017

    Basel, Switzerland

    Benchmarking: Incentives and Best Practises across Scientific Disciplines - Abstracting from Established Evaluations https://tess.elixir-europe.org/events/benchmarking-incentives-and-best-practises-across-scientific-disciplines-abstracting-from-established-evaluations The ELIXIR EXCELERATE Framework focuses on key aspects of modern research by bringing together method and infrastructure developers as well as researchers who aim to provide the scientific community with novel scientific tools, and cutting edge research results at the same time. New developments are generally benchmarked during development, with a certain composition of data and methods to benchmark against. Internal benchmarks often suffer from an incompleteness concerning both the test data and competing methods. Independent and community-driven blind benchmarks are addressing these issues and have been shown to be crucial for objectively assessing scientific methods in various communities, including substantial commitment from industry.   CASP is the prime example of community-driven benchmarking activities, with bi-annual editions from 1994. Since then, many other communities have come together to design and run their own benchmarking activities e.g. CAFA and Quest for Orthologs. The main benefit of recurring independent assessments is the task composition, which is varied from what was initially used to develop the methods. Since the tasks evolve over time, new aspects become crucial to be evaluated, reflecting current developments in the community. By being able to compare various methods on the same data set at the same point in time, new methods can prove their superiority in a much more transparent way as past individual benchmarks inherently suffer from the temporal focus on the methods available at that particular time. This workshop integrates experiences from various community-driven benchmarking efforts, illustrating key common elements. More importantly, these examples illustrate how benchmarking activities bring together to their members and foster new interactions and developments. The program comprises two main parts: (1) speakers from diverse communities reporting on successful recurring benchmarking implementations and (2) plenary discussions to identify common approaches, resulting in refined guidelines for establishing community based benchmarking. Further information for this workshop and Call for Abstracts is available at: https://bc2.ch/2017/program/workshops/ws6/ 2017-09-12 09:00:00 UTC 2017-09-12 21:00:00 UTC University of Basel, Basel, Switzerland University of Basel Basel Switzerland [] [] [] workshops_and_courses [] []
  • ELIXIR HoNs meeting

    13 September 2017

    Basel, Switzerland

    ELIXIR HoNs meeting https://tess.elixir-europe.org/events/elixir-hons-meeting ELIXIR Heads of Nodes will meet for a one day meeting to held alongside the [BC]2 conference in Basel on 13 September 2017. A full agenda and documents for the meeting will be made available to participants in due course.   2017-09-13 09:00:00 UTC 2017-09-13 00:00:00 UTC Basel, Switzerland Basel Switzerland [] [] [] meetings_and_conferences [] []
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