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59 events found

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  • Best practices in programming

    21 - 22 November 2011

    Bern, Switzerland

    Best practices in programming https://tess.elixir-europe.org/events/best-practices-in-programming 2011-11-21 00:00:00 UTC 2011-11-22 00:00:00 UTC SIB Swiss Institute of Bioinformatics main building of the University of Bern, Bern, Switzerland main building of the University of Bern Bern Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • Workshop Bio++

    13 February 2012

    Bern, Switzerland

    Workshop Bio++ https://tess.elixir-europe.org/events/workshop-bio 2012-02-13 00:00:00 UTC 2012-02-13 00:00:00 UTC SIB Wildhainweg, Bern, Switzerland Wildhainweg Bern Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • Frontiers in plant biology: From discovery to applications

    4 - 6 October 2012

    Ghent, Belgium

    Frontiers in plant biology: From discovery to applications https://tess.elixir-europe.org/events/frontiers-in-plant-biology-from-discovery-to-applications 2012-10-04 00:00:00 UTC 2012-10-06 00:00:00 UTC Nature and VIB Aula Ghent University, Ghent, Belgium Aula Ghent University Ghent Belgium Genomics Bioinformatics [] [] [] meetings_and_conferences [] []
  • International Conference on Genomics in Europe

    25 - 28 June 2013

    Ghent, Belgium

    International Conference on Genomics in Europe https://tess.elixir-europe.org/events/international-conference-on-genomics-in-europe 2013-06-25 00:00:00 UTC 2013-06-28 00:00:00 UTC Ghent, Belgium Ghent Belgium Genomics [] [] [] meetings_and_conferences [] []
  • First Steps with UNIX

    26 May 2015

    Bern, Switzerland

    First Steps with UNIX https://tess.elixir-europe.org/events/first-steps-with-unix-36517062-74a0-4b27-8cd0-debe2c1da612 2015-05-26 01:00:00 UTC 2015-05-26 01:00:00 UTC SIB Bern, Switzerland Bern Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • High Performance Computing (HPC) in Life Science - UBELIX oriented

    2 June 2015

    Bern, Switzerland

    High Performance Computing (HPC) in Life Science - UBELIX oriented https://tess.elixir-europe.org/events/high-performance-computing-hpc-in-life-science-ubelix-oriented 2015-06-02 01:00:00 UTC 2015-06-02 01:00:00 UTC SIB Bern, Switzerland Bern Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • Introduction to Next Generation Sequencing

    7 - 8 September 2015

    Bern, Switzerland

    Introduction to Next Generation Sequencing https://tess.elixir-europe.org/events/introduction-to-next-generation-sequencing-316bdacc-9937-4ce4-9e34-83daebeccae7 2015-09-07 01:00:00 UTC 2015-09-08 01:00:00 UTC SIB Bern, Switzerland Bern Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • NGS data analysis course, Pontificia Universidad Javeriana, Bogota, November 2015

    23 - 24 November 2015

    Bogota, Colombia

    Elixir node event
    NGS data analysis course, Pontificia Universidad Javeriana, Bogota, November 2015 https://tess.elixir-europe.org/events/ngs-data-analysis-course-pontificia-universidad-javeriana-bogota-november-2015 This course is organised for professionals in life sciences and biomedical sciences, preferably researchers or graduate students who are conducting or planning to conduct investigations that require the bioinformatic analysis of data from omics technologies of high throughput sequencing or next generation (NGS). 2015-11-23 16:15:00 UTC 2015-11-24 16:15:00 UTC Pontificia Universidad Javeriana, Bogota, Colombia Pontificia Universidad Javeriana Bogota Colombia [] Maria Bacadare Goitia [] [] [] [] []
  • First Steps with R in Life Science

    26 November 2015

    Bern, Switzerland

    First Steps with R in Life Science https://tess.elixir-europe.org/events/first-steps-with-r-in-life-science 2015-11-26 00:00:00 UTC 2015-11-26 00:00:00 UTC SIB Bern, Switzerland Bern Switzerland Statistics and probability Bioinformatics [] [] [] workshops_and_courses [] []
  • RNA-sequencing

    15 - 16 February 2016

    Bern, Switzerland

    RNA-sequencing https://tess.elixir-europe.org/events/rna-sequencing 2016-02-15 00:00:00 UTC 2016-02-16 00:00:00 UTC SIB Bern, Switzerland Bern Switzerland Bioinformatics [] [] [] workshops_and_courses [] []
  • Electronic Lab Notebook Introduction - Ghent

    18 April 2017

    Ghent, Belgium

    Elixir node event
    Electronic Lab Notebook Introduction - Ghent https://tess.elixir-europe.org/events/electronic-lab-notebook-introduction-ghent-638a1f0b-2d27-4f09-b291-72bee6d64baa 2017-04-18 10:00:00 UTC 2017-04-18 12:00:00 UTC VIB Bioinformatics Core PC room V114 1st floor front building VIB-UGent Research Building, Ghent, Belgium PC room V114 1st floor front building VIB-UGent Research Building Ghent Belgium 9052 [] [] [] [] [] []
  • Initiation GIMP and Inkscape Ghent

    2 May 2017

    Ghent, Belgium

    Elixir node event
    Initiation GIMP and Inkscape Ghent https://tess.elixir-europe.org/events/initiation-gimp-and-inkscape-ghent 2017-05-02 09:00:00 UTC 2017-05-02 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Ghent, Belgium Bio-Accelerator Ghent Belgium 9052 [] [] [] [] [] []
  • Initiation GIMP and Inkscape - Ghent

    9 May 2017

    Ghent, Belgium

    Elixir node event
    Initiation GIMP and Inkscape - Ghent https://tess.elixir-europe.org/events/initiation-gimp-and-inkscape-ghent-bd18f6fb-c469-418d-8b9e-bd73e73ce890 2017-05-09 09:00:00 UTC 2017-05-09 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Centre, Ghent, Belgium Bio-Accelerator Meeting Centre Ghent Belgium 9052 [] [] [] [] [] []
  • ELIXIR BrAPI BYOD/hackathon

    30 May - 1 June 2017

    Ghent, Belgium

    ELIXIR BrAPI BYOD/hackathon https://tess.elixir-europe.org/events/elixir-brapi-byod-hackathon An ELIXIR BrAPI BYOD/hackathon, organized by ELIXIR Belgium and ELIXIR NL will take place in Ghent, Belgium, May 30 - June 1.  The main aim of this event is to showcase the potential of FAIR data in the context of plant research and a hackathon on how to make the interoperability platform within the plant domain (BrAPI) FAIR reusing the general accepted MIAPPE standards and assessing data validation with ISA-TOOLS. Further details to follow. 2017-05-30 09:00:00 UTC 2017-06-01 00:00:00 UTC Ghent, Belgium Ghent Belgium [] [] [] workshops_and_courses [] []
  • ELIXIR BrAPI BYOD/hackathon

    30 May - 1 June 2017

    Ghent, Belgium

    ELIXIR BrAPI BYOD/hackathon https://tess.elixir-europe.org/events/elixir-brapi-byod-hackathon-de3b07f6-7334-47a4-a8ee-87d76840aa15 An ELIXIR BrAPI BYOD/hackathon, organized by ELIXIR Belgium and ELIXIR NL will take place in Ghent, Belgium, May 30 - June 1.  The main aim of this event is to showcase the potential of FAIR data in the context of plant research and a hackathon on how to make the interoperability platform within the plant domain (BrAPI) FAIR reusing the general accepted MIAPPE standards and assessing data validation with ISA-TOOLS. Further details to follow.   2017-05-30 09:00:00 UTC 2017-06-01 00:00:00 UTC Ghent, Belgium Ghent Belgium Plant biology [] [] [] workshops_and_courses [] []
  • ELIXIR Green Use case BYOD: BrAPI

    30 May - 1 June 2017

    Ghent, Belgium

    ELIXIR Green Use case BYOD: BrAPI https://tess.elixir-europe.org/events/elixir-green-use-case-byod-brapi ELIXIR BrAPI BYOD/hackathon, organized by ELIXIR Belgium and ELIXIR NL.   The BYOD will take place in Ghent, Belgium, 30 May - 1 June. The main aim of this event is to showcase the potential of FAIR data in the context of plant research and a hackathon on how to make the Interoperability Platform within the plant domain (BrAPI) FAIR reusing the general accepted MIAPPE standards and assessing data validation with ISA-TOOLS.   Four stages are defined to reach this goal. The outline of the process is as follows: Semantically model plant (breeding) concepts / type them in line with MIAPPE  Design and implement an FAIR data point frontend for BrAPI rest-based endpoints re-using the models developed under 1. Validate output of BrAPI endpoints (2) with the defined semantic typing (1) re-using ISA-TOOLS Write a manuscript. 2017-05-30 09:30:00 UTC 2017-06-01 17:00:00 UTC Ghent, Belgium Ghent Belgium [] [] [] workshops_and_courses [] []
  • Protein Structure Analysis

    15 June 2017

    Ghent, Belgium

    Elixir node event
    Protein Structure Analysis https://tess.elixir-europe.org/events/protein-structure-analysis-f095d4f5-e03b-4b1d-9f38-38dff017174a b'\r\n\r\n\n \r\n\r\n\n \r\n\r\n\n' 2017-06-15 09:30:00 UTC 2017-06-15 17:00:00 UTC ELIXIR Belgium VIB-UGent reseach Building FSVM PC room V114 (first floor), Ghent, Belgium VIB-UGent reseach Building FSVM PC room V114 (first floor) Ghent Belgium 9052 [] [] [] [] [] []
  • Functional Plant Bioinformatics - PLAZA

    14 - 15 September 2017

    Ghent, Belgium

    Elixir node event
    Functional Plant Bioinformatics - PLAZA https://tess.elixir-europe.org/events/functional-plant-bioinformatics-plaza 2017-09-14 10:00:00 UTC 2017-09-15 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator Meeting Center, Ghent, Belgium Bio-Accelerator Meeting Center Ghent Belgium 9052 [] [] [] [] [] []
  • NGS - Quality control, Alignment, Visualisation

    9 - 10 January 2018

    Bern

    Elixir node event
    NGS - Quality control, Alignment, Visualisation https://tess.elixir-europe.org/events/ngs-quality-control-alignment-visualisation Please note that this course is oversubscribed. We are not accepting applications, not even for the waiting list anymore. Overview Usage of NGS is increasing in several biological fields due to a very rapid decrease in cost. 2018-01-09 09:00:00 UTC 2018-01-10 00:00:00 UTC SIB, Bern SIB Bern [] training@sib.swiss [] [] workshops_and_courses [] []
  • Analysis of metabolome data

    15 January 2018

    Ghent, Belgium

    Elixir node event
    Analysis of metabolome data https://tess.elixir-europe.org/events/analysis-of-metabolome-data This training is intended for people who have a basic knowledge of R. Participants who have never worked with R should first follow the course Basic statistics in R.  The morning session will handle differences affecting data handling between GC-MS and LC-MS.  2018-01-15 09:30:00 UTC 2018-01-15 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Ghent, Belgium Bio-Accelerator Ghent Belgium 9052 [] [] [] [] [] []
  • Quick introduction to RStudio

    23 January 2018

    Ghent, Belgium

    Elixir node event
    Quick introduction to RStudio https://tess.elixir-europe.org/events/quick-introduction-to-rstudio 2018-01-23 10:00:00 UTC 2018-01-23 12:00:00 UTC ELIXIR Belgium VIB-UGent Research Building PC room V114, Ghent, Belgium VIB-UGent Research Building PC room V114 Ghent Belgium 9052 [] [] [] [] [] []
  • NGS - Genome variant analysis

    6 - 7 February 2018

    Bern

    Elixir node event
    NGS - Genome variant analysis https://tess.elixir-europe.org/events/ngs-genome-variant-analysis Please note that this course is oversubscribed. We are still accepting applications, but your name will be placed on a waiting list. 2018-02-06 09:00:00 UTC 2018-02-07 00:00:00 UTC SIB, Bern SIB Bern [] training@sib.swiss [] [] workshops_and_courses [] []
  • Ensembl Browser Workshop, Bogota, 11 February 2018

    11 February 2018

    Bogota, Colombia

    Elixir node event
    Ensembl Browser Workshop, Bogota, 11 February 2018 https://tess.elixir-europe.org/events/ensembl-browser-workshop-bogota-11-february-2018 Work with the Ensembl Outreach team to get to grips with the Ensembl browser, accessing gene, variation, comparative genomics and regulation data, and mine these data with BioMart. 2018-02-11 09:00:00 UTC 2018-02-11 17:00:00 UTC Universidad de los Andes - UniAndes, Bogota, Colombia Universidad de los Andes - UniAndes Bogota Colombia 111711 [] Astrid Gall [] [] [] [] []
  • Introduction to tidyverse R in Ghent

    7 March 2018

    Ghent, Belgium

    Elixir node event
    Introduction to tidyverse R in Ghent https://tess.elixir-europe.org/events/introduction-to-tidyverse-r-in-ghent The use of R in the data science field has increased enormously in the last few years. One very useful toolkit for a wide variety of analyses is the ‘tidyverse’: a collection of R-packages used for data manipulation, exploration and visualisation that share a common design philosophy. Tidyverse packages are intended to make statisticians and data scientists more productive by guiding them through workflows that facilitate communication, and result in reproducible work products. This is a four hour workshop, were you will learn: The difference between tidy and untidy data How to create tidy datasets and manipulate them using the main tidyr and dplyr verbs Integrate data visualization into your workflow using ggplot2 Use tidyverse functions to research biological problems   Requirements 2018-03-07 13:00:00 UTC 2018-03-07 17:00:00 UTC ELIXIR Belgium Campus: Campus Sterre S8 Victor Van Straelen - (wing B) - ground floor PC-room 0.1, Ghent, Belgium Campus: Campus Sterre S8 Victor Van Straelen - (wing B) - ground floor PC-room 0.1 Ghent Belgium 9000 [] [] [] [] [] []
  • Introduction to Biopython

    29 - 30 March 2018

    Ghent, Belgium

    Elixir node event
    Introduction to Biopython https://tess.elixir-europe.org/events/introduction-to-biopython ​​Understand what Biopython is and what it can do. Learn how to get Biopython running. Learn how to retrieve data records from NCBI. Learn how to read and write sequence files. Learn how to run BLAST from Python and read the results. Learn how to read and write phylogenetic tree files. Learn how to read and write 3D structure files. Learn how to use the Biopython documentation, examples, and where to find help. Understand what alternatives to Biopython exist and what they can do.   Biopython is the best-known Python library to process biological data. This training is aimed to empower you to use Biopython to make your research more efficient. The first day of the training is to give an overview of Biopython. You are going to start with your first steps in Biopython on the command line. Afterwards, you will take a tour of the most important components: sequences, NCBI queries, BLAST, trees, and 3D structures. You will try each of these modules on practical examples. Please don't hesitate to ask questions about Python basics or particular data formats (e.g. XML or NGS data). The second day of the training is to broaden your perspective: What other features does the library have? How can you use the documentation effectively? What is Biopython not capable of?  What can I do to visualize my data? Are there alternatives? If you have your own data that you would like to work on with Biopython in more detail, there is room for that. For me, the most important thing is to identify concrete Python modules and functions that help you to get your research done. Participants are encouraged to submit a description of their research topic and/or the questions they would like to answer with Biopython. Additionally, participants can bring their own data that they would like to process in Python to the training. 2018-03-29 09:30:00 UTC 2018-03-30 17:00:00 UTC VIB Bioinformatics Core BioAccelerator, Ghent, Belgium BioAccelerator Ghent Belgium 9052 [] [] [] [] [] []
  • First steps with R in Life Sciences

    19 - 20 April 2018

    Bern, Switzerland

    Elixir node event
    First steps with R in Life Sciences https://tess.elixir-europe.org/events/first-steps-with-r-in-life-sciences-9438ac46-684f-4653-bd28-f2c3525fd43f The course is full. Overview R is a complete, flexible and open source system for statistical analysis and graphics, which has become a tool of choice for biologists and biomedical scientists who need to analyse and visualise large amounts of data. 2018-04-19 09:00:00 UTC 2018-04-20 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • My code changed and using Git I know where and when

    24 April 2018

    Ghent, Belgium

    Elixir node event
    My code changed and using Git I know where and when https://tess.elixir-europe.org/events/my-code-changed-and-using-git-i-know-where-and-when 2018-04-24 15:00:00 UTC 2018-04-24 18:00:00 UTC VIB Bioinformatics Core Ghent VIB-UGent Research Building LEAF room (E124) right side of the building, first floor, Ghent, Belgium Ghent VIB-UGent Research Building LEAF room (E124) right side of the building, first floor Ghent Belgium 9052 [] [] [] [] [] []
  • RNA-seq: From quality control to pathway analysis

    30 - 31 May 2018

    Bern, Switzerland

    Elixir node event
    RNA-seq: From quality control to pathway analysis https://tess.elixir-europe.org/events/rna-seq-from-quality-control-to-pathway-analysis This course is oversubscribed. Overview This course will present all the bioinformatics tools required to analyze RNA-seq gene expression data, from the raw data to the biological interpretation. 2018-05-30 09:00:00 UTC 2018-05-31 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
  • A tour of machine learning - classification

    12 June 2018

    Ghent, Belgium

    Elixir node event
    A tour of machine learning - classification https://tess.elixir-europe.org/events/a-tour-of-machine-learning-classification ok Python Numpy/Pandas 2018-06-12 09:30:00 UTC 2018-06-12 17:00:00 UTC VIB Bioinformatics Core Bio-Accelerator, Ghent, Belgium Bio-Accelerator Ghent Belgium 9052 [] [] [] [] [] []
  • Docker for reproducible computational research

    13 June 2018

    Bern, Switzerland

    Elixir node event
    Docker for reproducible computational research https://tess.elixir-europe.org/events/docker-for-reproducible-computational-research Overview Bioinformatics analysis usually involves a large number of software tools, reference data and pipelines used to elaborate the results. 2018-06-13 09:00:00 UTC 2018-06-13 00:00:00 UTC SIB, Bern, Switzerland SIB Bern Switzerland [] training@sib.swiss [] Graduate studentsIndustryAcademicsPhDPhD students workshops_and_courses [] []
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