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6 events found

Node: Italy 

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  • Computational approaches to the study of protein interactions and rational drug design

    10 - 14 April 2017

    Padova, Italy

    Computational approaches to the study of protein interactions and rational drug design https://tess.elixir-europe.org/events/computational-approaches-to-the-study-of-protein-interactions-and-rational-drug-design In this workshop, participants will familiarise with docking approaches to the study of protein-protein interactions (PPIs) and protein-small molecule interactions. Irreversible binders design using molecular docking and computational methods to rational drug design will be also described, as well as the functional role of the intrinsically disordered proteins. The Plenary lectures of N. Davey (10.02.2017), A. Bonvin, S. Forli and S. Moro (11.02.2017) will be open and free to everyone but require application. Practical sessions are limited to 30 participants. On the afternoon of day 3, participants can bring their own data (e.g. proteins they want to study interactions for). They will be split in groups based on the type of system they want to study (i.e protein-protein, protein-small ligand interactions or virtual screening) and will analyse it assisted by A. Bonvin and S. Forli. 2017-04-10 14:00:00 UTC 2017-04-14 13:00:00 UTC Allegra Via, Lisanna Paladin, Marco Carraro Campus di Biologia e Biomedicina “Fiore di Botta”, University of Padova, Via del Pescarotto, 8, Padova, Italy Campus di Biologia e Biomedicina “Fiore di Botta”, University of Padova, Via del Pescarotto, 8 Padova Provincia di Padova Italy Protein-protein interactions Protein-protein interactions Protein-ligand interactions Protein-ligand interactions Protein interactions Medicinal chemistry University of Padova, Italy elixir.ita.training@gmail.com ELIXIR Italy Structural biologistsBioinformaticians 30 workshops_and_courses first_come_first_served Bioinformaticsprotein structureDrug designDockingProtein interactions
  • Training Course on Best practices for RNA-Seq data analysis

    27 - 29 September 2017

    Fisciano, Italy

    Training Course on Best practices for RNA-Seq data analysis https://tess.elixir-europe.org/events/training-course-on-best-practices-for-rna-seq-data-analysis Next-generation sequencing (NGS) of RNA libraries (RNA-Seq) has become increasingly common and it largely replaced microarray technology for gene expression profiling. The aim of this course is to get a deeper understanding of RNA-Seq experiments, providing a theoretical introduction to the data processing steps, together with practical sessions illustrating the use of the most popular data analysis tools. The classroom size is limited to 25 participants to optimize the learning and the interaction with the instructors. Starting from the raw sequenced data coming from different phenotypical samples (e.g disease vs healthy control samples), genes which are differentially expressed between the two conditions are determine. Some strategies are illustrated for detecting alternative splicing products, predicting novel isoforms and gene fusion events. Some methods for downstream analysis are described to give insight into how biological knowledge can be generated from RNA-Seq experiments. A lecture on single-cell RNA-Seq will provide an idea of how transcriptome data from individual cells is now emerging as a powerful tool, allowing the study of cell-to-cell gene expression heterogeneity in the same tissue. 2017-09-27 09:15:00 UTC 2017-09-29 16:30:00 UTC Anna Marabotti (University of Salerno and ELIXIR-IIB Training Team, Italy), Roberto Tagliaferri (University of Salerno, Italy), Alessandro Weisz (University of Salerno, Italy), Loredana Le Pera (ELIXIR-IIB Training Team and IIT, Italy), Allegra Via (ELIXIR-IIB Training Coordinator, CNR-IBPM, Italy) Campus di Fisciano, Università degli Studi di Salerno, Via Giovanni Paolo II, n. 132, Fisciano, Italy Campus di Fisciano, Università degli Studi di Salerno, Via Giovanni Paolo II, n. 132 Fisciano Provincia di Salerno Italy 84084 Transcriptomics RNA splicing Sequencing Bioinformatics RNA-Seq Gene expression Campus di Fisciano, University of Salerno, Italy elixir.ita.training@gmail.com, amarabotti@unisa.it ELIXIR Italy PhD students and young researchers in the life science and computational biology field who are planning to use RNA-seq data and are looking for the best practices to analyze these types of data 25 workshops_and_courses first_come_first_servedregistration_of_interest NGSRNA-SeqBioinformaticsData analysisHigh Throughput Sequencing AnalysisGene Expression
  • ELIXIR-EXCELERATE Train the Trainer

    27 - 29 September 2017

    Fisciano, Italy

    ELIXIR-EXCELERATE Train the Trainer https://tess.elixir-europe.org/events/elixir-excelerate-train-the-trainer ELIXIR-IIB, in cooperation with the ELIXIR-EXCELERATE Train-The-Trainer programme, will hold a Train the Trainer (TtT) event in connection with a course on “Best Practices for RNA-Seq analysis”. The course is made up of four sessions, covering: Learning principles and how they apply to training and teaching; Teaching techniques that can be used to enhance learner engagement and participation; Assessment and feedback in training and teaching; Lesson, course, and materials design. 2017-09-27 12:13:00 UTC 2017-09-29 12:13:00 UTC Allegra Via, Pedro Fernandes, Anna Marabotti, Roberto Tagliaferri, Loredana Le Pera Campus di Fisciano, Università di Salerno, Fisciano, Italy Campus di Fisciano, Università di Salerno Fisciano Provincia di Salerno Italy 84084 RNA-Seq RNA Campus di Fisciano, University of Salerno, Italy elixir.ita.training@gmail.com [] teachers / trainersAnyone who wants to become a teacher / trainer or a better one 15 workshops_and_courses registration_of_interest TtT, Train the Trainer, Educational psychology, cognitive science, teaching practices
  • ELIXIR-EXCELERATE Train the Trainer

    30 - 31 May 2019

    Padova, Italy

    ELIXIR-EXCELERATE Train the Trainer https://tess.elixir-europe.org/events/elixir-excelerate-train-the-trainer-471e12ca-cd2b-4a70-851f-9f0cd1c25148 ELIXIR-IIB, in cooperation with the ELIXIR-EXCELERATE Train-The-Trainer programme, will hold a Train the Trainer (TtT) event. The course is made up of four sessions, covering: - Learning principles and how they apply to training and teaching - Teaching techniques that can be used to enhance learner engagement and participation - Lesson, course, and materials design - Assessment and feedback in training and teaching 2019-05-30 09:00:00 UTC 2019-05-31 18:00:00 UTC Ivan Mičetić, Silvio Tosatto, Allegra Via, Loredana Le Pera Università degli Studi di Padova - Campus di Biologia e Biomedicina "Fiore di Botta", 8, Via del Pescarotto, Padova, Italy Università degli Studi di Padova - Campus di Biologia e Biomedicina "Fiore di Botta", 8, Via del Pescarotto Padova Provincia di Padova Italy 35131 Univeristy of Padua elixir.ita.training@gmail.com [] teachers / trainersAnyone who wants to become a teacher / trainer or a better one 20 workshops_and_courses first_come_first_servedregistration_of_interest Educational psychologyteaching practicesTrain the trainerTtT
  • Carpentries Instructor Training - ATHENA RC

    15 - 17 July 2019

    Athens, Greece

    Carpentries Instructor Training - ATHENA RC https://tess.elixir-europe.org/events/carpentries-instructor-training-athena-rc Find out more at https://fpsom.github.io/2019-07-15-ttt-ELIXIR-Athens/ 2019-07-15 12:00:00 UTC 2019-07-17 12:00:00 UTC Center for Research and Technology Hellas Athena Research & Innovation Center in Information Communication & Knowledge Technologies, 6, Artemidos, Athens, Greece Athena Research & Innovation Center in Information Communication & Knowledge Technologies, 6, Artemidos Athens Greece [] Fotis E. Psomopoulos <fpsom@certh.gr> [] [] 25 workshops_and_courses first_come_first_served []
  • 4 Simple recommendations for Open Source Software workshop

    17 - 19 July 2019

    Athens, Greece

    4 Simple recommendations for Open Source Software workshop https://tess.elixir-europe.org/events/4-simple-recommendations-for-open-source-software-workshop Find out more at https://fpsom.github.io/2019-07-15-ttt-ELIXIR-Athens/ 2019-07-17 12:00:00 UTC 2019-07-19 12:00:00 UTC Center for Research and Technology Hellas Athena Research & Innovation Center in Information Communication & Knowledge Technologies, 6, Artemidos, Athens, Greece Athena Research & Innovation Center in Information Communication & Knowledge Technologies, 6, Artemidos Athens Greece [] Fotis E. Psomopoulos <fpsom@certh.gr> [] [] workshops_and_courses first_come_first_served []

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