Organizer: VLSCI - University of Melbourne

Start: Wednesday, 08 June 2016 @ 09:00

End: Wednesday, 08 June 2016 @ 00:00

Venue: Lab-14, VLSCI

City: The University of Melbourne

Country: Australia

Scientific topic: Genomics, Bioinformatics, Data architecture, analysis and design

Description:

This tutorial covers the concepts of detecting small variants (SNVs and indels) in human genomic DNA using a small set of reads from chromosome 22. The tutorial is designed to introduce the tools, datatypes and workflow of variant detection. We will align reads to the genome, look for differences between reads and reference genome sequence, and filter the detected genomic variation manually to understand the computational basis of variant calling.

Event type:
  • Workshops and courses

Keywords: Bioinformatics, variantcalling, ABR, VLSCI

Variant Calling with Galaxy and the Genomics Virtual Laboratory (beginners) https://tess.elixir-europe.org/events/variant-calling-with-galaxy-and-the-genomics-virtual-laboratory-beginners This tutorial covers the concepts of detecting small variants (SNVs and indels) in human genomic DNA using a small set of reads from chromosome 22. The tutorial is designed to introduce the tools, datatypes and workflow of variant detection. We will align reads to the genome, look for differences between reads and reference genome sequence, and filter the detected genomic variation manually to understand the computational basis of variant calling. 2016-06-08 09:00:00 UTC 2016-06-08 00:00:00 UTC VLSCI - University of Melbourne Lab-14, VLSCI, The University of Melbourne, Australia Lab-14, VLSCI The University of Melbourne Australia Genomics Bioinformatics Data architecture, analysis and design [] [] [] workshops_and_courses [] BioinformaticsvariantcallingABRVLSCI