Organizer: University of Cambridge

Host institution: University of Cambridge Bioinformatics Training

Start: Wednesday, 18 November 2015 @ 09:30

End: Wednesday, 18 November 2015 @ 17:00

Venue: Craik-Marshall Building

City: Cambridge

Country: United Kingdom

Postcode: CB2 3AR

Target audience:
  • Postdocs and Staff members from the University of Cambridge
  • Institutions and other external Institutions or individuals
Description:

This workshop will guide novice users through the process of analysing interaction networks – that allow biologists to map and characterise signalling pathways and to predict the function of unknown proteins. It will use practical examples in the popular open-source tool Cytoscape and the PSICQUIC client to access several protein interaction repositories at the same time to integrate protein data from different sources. Data from external sources will then be incorporated using different Cytoscape apps to perform clustering and GO enrichment analysis over our newly created networks.

The timetable for this event can be found here.

Please note that if you are not eligible for a University of Cambridge Raven account you will need to book by linking here.''

Event type:
  • Workshops and courses
EMBL-EBI: Network Analysis with Cytoscape and PSICQUIC https://tess.elixir-europe.org/events/embl-ebi-network-analysis-with-cytoscape-and-psicquic-7ff314c2-1fea-4b62-9321-3265a50eabea This workshop will guide novice users through the process of analysing interaction networks – that allow biologists to map and characterise signalling pathways and to predict the function of unknown proteins. It will use practical examples in the popular open-source tool Cytoscape and the PSICQUIC client to access several protein interaction repositories at the same time to integrate protein data from different sources. Data from external sources will then be incorporated using different Cytoscape apps to perform clustering and GO enrichment analysis over our newly created networks. The timetable for this event can be found [here](http://www.ebi.ac.uk/training/workshop/network-analysis-cytoscape-and-psicquic). Please note that if you are not eligible for a University of Cambridge [Raven](http://www.ucs.cam.ac.uk/docs/faq/raven/n5) account you will need to book by linking [here](http://marstons.bio.cam.ac.uk/course-booking/?CourseID=Network%20Analysis%20with%20Cytoscape%20and%20PSICQUIC_bioinfo-ebinetworks_18.11.2015_1538946&CourseName=Network%20Analysis%20with%20Cytoscape%20and%20PSICQUIC&CourseDate=18.11.2015&CourseDuration=1&EventID=1538946).'' 2015-11-18 09:30:00 UTC 2015-11-18 17:00:00 UTC University of Cambridge Craik-Marshall Building, Cambridge, United Kingdom Craik-Marshall Building Cambridge United Kingdom CB2 3AR University of Cambridge Bioinformatics Training [] Postdocs and Staff members from the University of Cambridge Institutions and other external Institutions or individuals workshops_and_courses [] []