Content Providers
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LIPID MAPS
LIPID Metabolites And Pathways Strategy (LIPID MAPS®) is a multi-institutional supported website and database that provides access to a large number of globally used lipidomics resources. LIPID MAPS® has internationally led the field of lipid curation, classification, and nomenclature since 2003....
5 training materials0 events (1 past event)LIPID MAPS https://www.lipidmaps.org/ https://tess.elixir-europe.org/content_providers/lipid-maps-8d2f062e-3051-4752-ba8d-0626399e2e91 LIPID Metabolites And Pathways Strategy (LIPID MAPS®) is a multi-institutional supported website and database that provides access to a large number of globally used lipidomics resources. LIPID MAPS® has internationally led the field of lipid curation, classification, and nomenclature since 2003. We strive to produce new open-access databases, informatics tools and lipidomics-focused training activities will be generated and made publicly available for researchers studying lipids in health and disease. LIPID MAPS® Lipidomics Gateway was created in 2003 via an NIH “Glue Grant” to provide access to lipid nomenclature, databases, tools, protocols, standards, tutorials, meetings, publications, and other resources to serve the international lipid research community. LIPID MAPS® is currently funded by a multi-institutional grant from Wellcome, held jointly by Cardiff University, University of California San Diego, the Babraham Institute Cambridge, and Swansea University, as well as an Innovation Study funded by ELIXIR. LIPID MAPS® supports researchers to conduct integrative systems-level analyses of lipidomics in physiology and pathophysiology. /system/content_providers/images/000/000/672/original/LM_logo.jpg?1681981489 -
Jalview
Jalview (www.jalview.org) is free-to-use sequence alignment and analysis visualisation software that links genomic variants, protein alignments and 3D structure.
Protein, RNA and DNA data can be directly accessed from public databases (e.g. Pfam, Rfam, PDB, UniProt and ENA etc.). Jalview has...
0 events (2 past events)Jalview http://www.jalview.org/ https://tess.elixir-europe.org/content_providers/jalview Jalview (www.jalview.org) is free-to-use sequence alignment and analysis visualisation software that links genomic variants, protein alignments and 3D structure. Protein, RNA and DNA data can be directly accessed from public databases (e.g. Pfam, Rfam, PDB, UniProt and ENA etc.). Jalview has editing and annotation functionality within a fully integrated, multiple window interface. The sequence alignment programs Clustal Omega, Muscle, MAFFT, ProbCons, T-COFFEE, ClustalW, MSA Prob and GLProb can be run directly from within Jalview. Jalview integrates protein secondary structure prediction (JPred), generate trees, assesses consensus and conservation across sequence families. Journal quality figures can be generated from the results. The Jalview Desktop will run on Mac, MS Windows, Linux and any other platform that supports Java. It has been developed in Geoff Barton's group (www.compbio.dundee.ac.uk) in the School of Life Sciences (www.lifesci.dundee.ac.uk) at the University of Dundee with funding from the BBSRC and the Wellcome Trust. /system/content_providers/images/000/000/091/original/logo-boxg.png?1524735946 -
Seqera Labs
Founded by the creators of Nextflow, Seqera Labs mission is to foster the adoption of professional open source software and strengthen the community effort around the Nextflow ecosystem.
We organize training events for your team or organization. These are intended for...
0 events (1 past event)Seqera Labs http://www.seqera.io https://tess.elixir-europe.org/content_providers/seqera-labs Founded by the creators of [Nextflow](http://www.nextflow.io), Seqera Labs mission is to foster the adoption of professional open source software and strengthen the community effort around the Nextflow ecosystem. We organize training events for your team or organization. These are intended for anyone who wishes to learn about the technology, starting from basic through to advanced concepts. Our most popular intensive two-day course includes topics on containerization, cloud deployment, Git integration and best practices for reproducibility. /system/content_providers/images/000/000/111/original/Seqera_Labs_-_grey.png?1553771707